Salvelinus sp. IW2-2015 (Arctic char): 111962525
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Entry
111962525 CDS
T05762
Name
(RefSeq) leucine-rich repeat-containing protein 4-like
KO
K16351
netrin-G2 ligand
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111962525
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
V-set
ig
LRRNT
Ig_2
DUF3915
Motif
Other DBs
NCBI-GeneID:
111962525
NCBI-ProteinID:
XP_023841438
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Position
LG4q.1:29:complement(74589953..74594236)
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AA seq
693 aa
AA seq
DB search
MSTVGRVSLQPTWNAALLALLALTMVPALSVCQPAGLGPPPNPQNCPVVCSCTNQIGKVV
CTRRGLVRVPPGIPTNTRYLNLMENSIETIQADTFRNLHHLEVLQLGRNAIRQIEVGAFN
GLASLNTLELFDNRLTGIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE
LRRLEYISDGAFEGLQNLKYLNLGMCNLREMPVLSPLTGLEELEMSENTFPEMKPGSFRG
LRSLQKLWIMNSGITVIARNAFDDITALVELNLAHNNLSSLPHDLFSPLQYLVELHLHHN
PWRCDCDVVWLSWWLREYIPTNSTCCGRCHSPAHMRGRYLVEVDQTTFQCSAPFILDAPR
DLNISAERVAELKCXTAXMSSVRWLLPNGTVLTHGSSHPRISVLNDGTLNFSNVLPSDKG
VYTCMVTNMAGNSNASAYLNVSSAELNTSNLSYFTTVTVEVLEPTVEEIPKPKPTIPASP
SVFQPVFISTPTMLLQSTQTPRQVSLPTARGPTHPSASLDEVVKTTKIIIGCFVAVTLLA
AAMLIAFYKLRKRHQQRSTVAVARTIEIIQMDEEVPEVPPARSGSSESEETGLALPTILK
TRYISSSSSSSHRDRDRDRDRDRDRDRDRDRDRDRDRAAYGAHWTHNNLGNSLHRSSSRQ
HHQQHHHSLISTIAEPYVIKTTHTKEKVQETQI
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtgggccgggtctctctgcagcccacctggaacgcagccctgctcgccctg
ctagccctcaccatggtgccagctctcagtgtgtgccagcctgccggcctgggtcctccc
cccaacccccagaactgtccggtggtgtgctcctgtaccaaccagattggtaaggtggtg
tgtacacgccgtggcctggtcagggtgccccccgggatccccaccaacaccagatacctc
aacctgatggagaacagcatcgagaccatccaggctgacaccttcagaaacctacaccat
ctggaggtgctgcagctgggcaggaacgccatcaggcagatcgaggtgggggccttcaac
ggcctggccagcctcaacaccctggagctgtttgacaacagactgacggggatccccagc
ggggcttttgagtacctgtccaagctgagggagctgtggctgaggaacaaccccatcgag
agcatcccctcctacgccttcaacagggtgccctctctgatgaggctggacctaggggag
ctcaggaggctagagtacatctctgatggggcctttgagggcctgcagaacctcaagtac
ctgaacctggggatgtgtaacctcagggagatgcctgtcctgtctcccctgactggcctg
gaggagctggagatgtctgaaaacactttccctgagatgaagcccggctctttccgcggc
ctgcgctcgctacagaaactctggatcatgaactctgggatcaccgtgatcgcgaggaac
gccttcgatgacatcacagcactggtggagctgaatctagcccataataacctgtcatct
ctaccacacgacctcttttccccgctgcagtacctggtggagctccatctccaccacaac
ccctggaggtgtgactgtgacgtggtctggctgtcctggtggctcagggagtacatcccc
actaactccacctgctgcggccgctgccactcccctgcccacatgagaggacgatacctg
gtggaggtggaccagaccacattccagtgctctgctcccttcatcctggatgctcccagg
gacctcaacatctctgcagagagagtggctgarctcaagtgtcktacrgcckccatgtca
tcggtccgatggctgcttcctaacgggaccgttctgacccacggatcgtctcaccctcgg
atctctgtcctcaatgatggaacgctcaacttctccaacgttttgccgtcggacaagggt
gtctatacttgcatggtgactaacatggcaggtaactccaacgcctcagcctacctgaat
gtcagcagtgccgagctcaacacctccaacctgtcctatttcactacagtgactgtggag
gtgctggagcccaccgtagaggagatccccaaacccaaacccaccatcccagcctcgccc
tccgtgttccagcccgtcttcatctccacgcccaccatgctgctccagagcacccagacc
ccccgccaggtgtctctccccacagcccgtggccccacccacccctccgccagcctggac
gaggtcgtgaagacaaccaagatcatcattggctgcttcgttgccgtgacgctccttgcc
gctgccatgttgatcgccttctacaagctgcgtaagcggcaccagcagcggagcacggtg
gcggtggcgcggaccatcgagatcatccaaatggacgaggaggttcccgaggttccaccg
gccaggtcaggttctagcgagtctgaggagacggggctggctctgcccaccatcttaaaa
acaagatacatctcatcatcctcatcgtcctcccacagagacagagacagagacagagac
agagacagagacagagacagagacagagacagagacagggacagggacagagctgcctac
ggggctcactggacccataacaacctgggaaactccctgcaccgttcctccagccgccag
catcatcagcagcaccaccacagcctcatcagcaccatcgcagagccctacgtcattaag
accactcacaccaaggagaaggtccaggagacccagatctaa
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