Salvelinus sp. IW2-2015 (Arctic char): 111963464
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Entry
111963464 CDS
T05762
Name
(RefSeq) protein transport protein Sec23A
KO
K14006
protein transport protein SEC23
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111963464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111963464
Membrane trafficking [BR:
salp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111963464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
111963464
NCBI-ProteinID:
XP_023842688
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Position
LG4q.2:21324588..21374158
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AA seq
765 aa
AA seq
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MATFPEFIAQNEERDGVRFSWNVWPSSRLEATRMVVPVASLFTPLKERPDLPPIQYEPVL
CSRATCRAVLNPLCQVDYGAKLWACNFCYQRNQFPPTYAGISEVNQPAELLPQFSTIEYV
VQRGPQMPLVFLYVVDTCMEDEDLQALKESLQMSLSLLPPTALVGLITFGRMIQVHELGC
DGISKSYVFRGTKDLNAKQLQEMLGLTKPTAAQAGRGPQAPQPPLSNRFLQPVQKIDMNL
TDLLGELQRDPWPVTQGKRPLRSLGSAMSIAVGLLECTFPNTGARIMTFIGGPATQGPGM
VVGDELKTPIRSWHDIEKDNAKFMKKGTKHYEALASRASTNGHIIDIYACALDQTGLLEM
KCCSNHTGGYMVMADSFTTSLFKQTFQRVFTKDVAGAFKMAFAGTLEIKTSREIKISGAI
GPCVSLNAKGPCVSENEIGTGGTSQWKICGLDHNTTLAVYFEVVNQHNAPIPQGGRGAVQ
YVTQYQHSSGQKRIRVTTTARNWADAGTQIQSIAASFDQEASAILMARLAVYRAETEEGP
DVLRWLDRQLIRLCQKFGDYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHQFMRQDLTQSLIMIQPILYAYSFNGPPEPVLLDSSSILPDRILLMDTFFQILIYH
GETVSQWRKAGYQEMPEYENFRHLLHAPADDAQEILHSRFPMPRYIDTEFGGSQARFLLS
KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccttcccagagtttatcgcccagaatgaggagcgtgatggggtgcgtttcagc
tggaacgtctggccctccagtcgtctggaggccacccgcatggtggtccccgtggcctct
ttgttcacccccctgaaggagcgcccagacttgcccccaatacagtatgagcctgtgttg
tgtagcagggcaacctgccgcgcggtccttaacccactctgccaagtggattacggagcc
aaactgtgggcttgcaacttctgctatcagagaaatcagtttccacctacctatgctggg
atatcagaggtgaaccagccagctgagctgctgccacagttctccaccattgaatatgtt
gtccagagaggtccccagatgcctctggttttcctgtacgtggtggacacctgcatggag
gatgaagacctgcaggctctgaaggagtccttacagatgtccctgtcgctgctgcctcct
acagccttggttggcctcatcaccttcggacgcatgatccaggtccacgagctgggctgc
gatggcatctcaaagagctacgtcttcaggggaactaaagaccttaacgccaagcagctg
caggagatgctgggcttgaccaaacccactgctgcacaggcaggaaggggaccacaagct
ccacagccccccctttccaacagattcctccagcctgtccagaagattgacatgaacctg
acagacctgcttggagagctccagagggatccctggcctgtcactcagggcaaacgcccc
ctccgctcgttagggtcggccatgtccatcgctgttggcttgctggagtgcaccttccct
aacactggggcacgcatcatgaccttcatcggtggtccagccactcagggtccaggcatg
gtggtaggagatgagctaaagacccctattcgctcctggcacgacattgagaaggacaac
gccaagttcatgaaaaaggggaccaaacattacgaggcattggcgagccgtgcctccacc
aacggccacatcatagacatctatgcctgtgctctggaccagaccggactgctggagatg
aagtgttgttccaatcacaccggaggctacatggtgatggcagactctttcaccacctca
ctattcaaacaaaccttccagagggtctttaccaaagatgtggctggagccttcaagatg
gccttcgctggcactctggagataaagacgtctcgagagatcaagatttcaggagccatc
gggccatgtgtgtcattaaatgccaaaggaccgtgtgtgtctgaaaatgaaattggaaca
gggggcacatctcaatggaagatatgtggtcttgaccataacaccacgctggcagtgtac
tttgaggtagtcaatcagcataatgcacctataccccaggggggccgaggcgcggtccag
tacgtcacccagtaccaacactccagtggacagaaacgcatccgagtcaccaccacagcc
agaaactgggcagatgcagggacccagatccagagcattgcagcatcatttgaccaggag
gcctcagccatcctgatggccagactggctgtgtatcgcgctgagacggaggagggtccc
gacgtgctacgctggctggacagacagctcatccgactgtgtcagaagtttggagattat
cataaggatgatcccaactccttccgcttctcagaaaccttttctctctatcctcagttt
atgttccatctgagaaggtctccctttctgcaagtgttcaacaacagtccagatgagagc
tcgtactacagacaccagttcatgcgtcaggacctgacccagtctctcatcatgatacaa
cccattctctatgcttactccttcaacgggcccccagagcctgtgttgctggacagtagc
agtatccttcctgatcgcatccttctcatggacaccttcttccagatcctcatctaccat
ggcgagactgtgtctcagtggcgtaaggcaggctaccaggagatgcccgagtacgagaac
ttccgccacctgctgcaygctccagcggacgacgcccaggagatcctgcacagccgcttc
cctatgccccgctacatagacacagagtttggcggatcacaggctcgtttcctgctatct
aaagttaacccatcacaaacccacaacaacatgtatgcatggggccaggagtcgggagcc
ccaatcctgacagatgacgtcagtctacaggtattcatggaccacctgaagaagctggct
gtgtccagcgctgcttga
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