Salvelinus sp. IW2-2015 (Arctic char): 111965890
Help
Entry
111965890 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12-like
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111965890
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
111965890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
111965890
NCBI-ProteinID:
XP_023846067
LinkDB
All DBs
Position
LG6.2:complement(16802296..16852820)
Genome browser
AA seq
2176 aa
AA seq
DB search
MMAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLRYNTFPDTGKRKPQVNQKDNFWLVTARSQSSINNWFTD
LAGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRSAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQSPSQGCGSPLPANPAEVDTAMKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECFEKVRPGEDELLKLLLPLLLQYSGEFVLSAYLSRRLAYF
CTRRLNLLLSDGSLGPGAGGHPAHSILAQPGNALPPTPTSQPTGGNQPQTPFTDFYICPQ
HRPLVFGLSCMLQSIVLCCPXALVWHYSLTDSRNKTGSPLDPTPISPSNLPMPGAKAPLH
EQVRAKVREIEEQVKDRGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDFS
NSLDSLYNRIFGSGQSKDGHEMSPDDDAVVTLLCEWAVCCKRSGRHRAMVVAKLLEKRQA
EIEAERCGESEVVDEKGSVSSGSLSAATLPVFQDVLLQFLDTQAPMLTEAGNESERVEFS
NLVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSDEPSDESERKEQDAGSS
VKNEDTGLSELMEIDHNSSANFDEMFSPPTHCESKGSPSPEKPAPEQEGKGACKDKALDP
AFPLVYEQPRHIQYATHFPIPQEESASHECNQRLVVLYGVGKQRDEARHAIKKITKDILK
VLNRKSTAETGGEEGQKRKRTKPEAFPTAEDIFSKFQHLSHFDQHQVTSQVSRNVLEQIT
SFALGMSYHLPLVQHIQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSSLVGS
YTTGLCLCIVAVLRRYHSCLILNPEQTAQVFDGLRIVVKSGVNPADCSSAERCILAYLYD
LYTSCCHLKSKFGEIFSEFCSKVKNSIYCNIDPSDSNMLWDPVFMMEAIANPSAHNFNHS
MVGKILNDSPANRYSFVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWLGVLK
ALCCSSNNGNCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLLN
AACSEQDSEPGARLTCRILLHLFKTPQRNPCPQDGAKSDKSSVGIRSSCDRHLLAASQNS
IVVGAVFAVLKAVFMLGDAELKGSGFSHPAGLDDIADDDMGSKKSGGRTVSIETASLDVY
AKYVLKSICQQEWVGERCLRSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSEEGDN
PQRQRIKHILQNMDQWTMRQSSLELQLMIKQSTNNELYSLLENIAKATIEVFQKSAEMNS
TNLSGNGSAGAGGSASNSNNPSKKPVLSSSERSGVWLVAPLIAKLPTSVQGHVLKAAGEE
LEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQI
VTNWREDQYQDDCKAKQMMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTV
DMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSE
SLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFEKEGLQVSTKQKISPWDVFEGL
KHSAPLSWGWFGTVRVDRKVTKFEEQQRFLLYHTHLKPKPRSYYLEPLPLPPEDEEPPTP
APQEPEKKMAEPVKPEKSVSVVSSDSTKKKTKKKKTPSTNKTEDYVTRTQGGVSYGTCIP
PDTLIGQQAHPYSRIGYNQQPMGMYAQNQPLPPGGPGLDTPYRPARNPQMGKMMPTRPSY
PGMMPGMQGGMPGMMGMDKQYPMGYKPQPNIPQGQILRQQLQVRLNQSMIGPQMRQMTPN
QQYSSMQPSQNISQGYTTYGSHIGMQPHPSQAGGIVPPSYGNQGFQGSHPGANPAVVDSL
RQRPSGYVHQQAPGYSHTMQNTPRFPHQSIQPAPVMQPLSHMGVHPGMRPNQMLAEQQQQ
QQQQQQQVQQQQQQVQQQQQQVQQQQVQQQQQQVQQQQQVQQQQQVQQQQQVQPQQVQQQ
QQQQQQQQQQVASAQPPGTQAQNQALGMQQPMFPRQGMQQTQMQQTQQQQQTAALVRQLQ
QQLSNTQPGQNTNSYY
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgctttcgggatcttaagttacgaacaccggcccctgaagcggccacgactc
ggacctccggacgtttatccacaagacccaaagcaaaaagaggatgaattgactgcgttg
aatgtgaagcaaggatttaataatcaaccggctgtgtctggggatgaacatggaagtgct
aaaaatgtcaacttcaatccctcaaagattagttcaaacttcagcagcatcattgcagag
aagttgcgctacaacacatttccagacacaggcaaacggaagcctcaggtcaaccagaag
gacaatttctggctcgttactgccaggtcacaaagctctatcaacaactggtttacagac
ttggctgggactaaacccctcacccagctggccaagaaggtgccgatctttagtaaaaag
gaggaggtttttggctacttggccaagtacacagtacctgtgatgcgttcggcatggatg
atcaagatgacctgtgcgtatcacgccgccatcacagaaacaaaagtcaagaagcggcac
gtgattgacccctgcatagaatggactcagatcatcactaagtacctgtgggagcagttg
cagaaggtggccgagttctaccgccagtctcccagccagggctgtggctcccccctcccg
gccaatccggccgaggtggacacggccatgaagcagtgggagtacaacgagaagctggcc
atgttcatgttccaggatggcatgctagatagacacgagttcctgacgtgggtgttggaa
tgcttcgagaaagtccgacctggagaggatgagcttctgaagctgctgctgcccctcctg
ctacagtactcaggggagtttgtgctgtcggcctacctgtctcggagactggcctacttc
tgcacgcgacgcctcaacctgctgctaagcgacgggagcctgggacccggcgccgggggg
cacccggcacacagcatcctggcgcagccggggaacgccctgccccccacacccacctcc
cagcccacggggggcaaccaaccccagacccccttcacagacttctacatctgccctcaa
cacaggcccttggtgtttgggctcagctgcatgctacagagtatcgtgctgtgctgtcca
ngtgccctggtgtggcactactctctgacagacagccggaacaagactggttccccactg
gaccctactcccatatccccctccaacctgcccatgccaggggcaaaggcacctttacac
gagcaggtccgtgcaaaggtcagagaaatagaggagcaggtcaaggacagagggcaggct
gtggagttccgctggtcctttgataaatgtcaggagacaactgctggcttcaccattgga
agggtcctacacaccctggaggttctagacaaccacagctttgagaagtcagacttcagc
aactccctggattccctttacaaccgcatcttcggctcgggccagagcaaagacggccac
gagatgtcccctgatgacgatgccgtggtgaccctgctgtgtgagtgggcggtgtgctgc
aagaggtctggccgtcacagggccatggtggtggccaagctgctggagaagagacaagcg
gagatcgaagccgagaggtgcggcgagtcggaggtggtggatgagaaaggctcagtttct
tcaggatctctctcggcggccaccctgcctgtgtttcaagacgtgctcctgcagttcctg
gacacccaggcccccatgctcacggaggcaggcaacgagagcgagcgtgtggagttctct
aacctggtgctgctcttctgcgagctcatccgccacgacgtcttctctcacaacatctac
atgtgcacgctcatctcccgcggggacctggcctctgactcccacctgccccgcccccgt
tcccctagtgatgagccttcagacgaatcagagcgcaaggagcaggatgcaggcagcagc
gtcaagaacgaggacactggtctctccgagttaatggagatcgatcacaactcgagcgct
aatttcgatgagatgttttctccccccactcactgtgagtcaaagggcagcccctctccc
gagaagcctgccccggaacaggaagggaagggcgcctgcaaagacaaggccctggatcct
gccttcccattggtgtacgagcagccccgccacatccaatacgctacccacttccccatc
ccccaggaggagagtgccagtcacgagtgtaaccagcgactggtggtgctctacggcgtg
ggcaagcagcgagacgaagcgaggcacgccatcaagaaaatcaccaaagacatcttgaag
gtgctcaaccgcaaaagcacagcagagaccggaggagaggaaggacagaagagaaagagg
actaagcctgaggccttccccacagcagaggacatattctccaaattccagcacctctcc
cattttgatcagcaccaggtcacctctcaggtgtccaggaatgttctggaacagatcacc
agctttgccttagggatgtcctatcacctgccccttgtccagcacatccagttcatcttt
gacctcatggagtactccctcaacattagtggcctcatcgactttgccattcagctgctg
aatgagctgagcctggtggaggcagagctgctgctcaagtcatccagcctggtgggtagc
tacaccacaggtctgtgtctgtgcatcgtggccgtgctgaggaggtaccactcctgcctc
atcctcaacccagagcagacggcacaggtctttgacgggttgcgcatcgtggtgaagtcg
ggggtgaacccagccgactgctcctcagccgagcgctgtatcctggcctacttgtacgac
ctctatacctcctgctgtcacctaaagagcaagtttggagagatcttcagtgagttctgc
tccaaggtgaagaactccatatactgtaacatcgacccgtctgactccaacatgctgtgg
gaccctgtgttcatgatggaggccatcgccaatccgtcggcccacaatttcaaccacagc
atggtgggtaagatcctcaatgacagccccgccaaccgctacagcttcgtctgcaacgtg
ctcatggacgtgtgcgtggaccacagggaccccgagagggtgaatgacattgggatccta
tgtgcggagctgactgcctactgtcgctctctgagtgctgagtggctgggcgtcctcaaa
gccctctgctgctcctccaacaacggcaactgtggcttcaacgacctcctgtgcaatgtg
gatgtcagcgatctctccttccatgactctctggccaccttcgtagccatcctcatcgcc
cgccagtgtcttcttctggaggacctggtccgctgcgtagccatcccctccctcctcaac
gctgcctgcagtgagcaggactctgagcccggagcccgtctgacctgcaggatcctgctg
cacctcttcaagaccccccagcgcaacccctgcccccaggatggagccaagtcagataaa
tcttctgttgggatccggtcgtcgtgtgaccgtcaccttctggctgcctcacagaacagc
atagtggttggagctgtttttgctgtcctaaaggccgtctttatgctgggcgatgcagaa
ctgaagggatcgggattctctcaccccgccggcctcgacgacatcgccgatgacgacatg
ggttccaagaagtcgggcggccgcaccgtctccatagaaacggccagcctggacgtgtac
gccaagtatgtgctgaagagcatctgccaacaggagtgggtgggcgagcgctgtctcagg
tccctgtcggaggacagcagtgccctgcaggacccggtgctggttaacatccaggcccag
cggttgctgcagctcatctgctacccccaccgccagctggacagtgaggagggggacaac
ccccagaggcagcgcatcaaacacatcctccagaacatggaccagtggaccatgagacag
tcatccctggagctgcagcttatgatcaagcagagtactaacaacgagctgtactcctta
ttagagaacatcgccaaggccactatcgaggtgttccagaagtcagcggagatgaactcc
accaacctctcagggaacgggtcagccggcgctggaggttctgcctccaacagcaacaac
ccaagcaagaaaccagtgttgagttcgtctgagcggtctggtgtgtggctggtggcgcca
ctgatagccaagctgcccacctcggtccagggccacgtcctgaaggcggcaggggaggag
ctagagaagggccagcatctggggtcctcctcacgcaaggagagggaccggcagaaacag
aaaagcatgtctctgctgagccagcagcccttcctgtctctggtgctgacctgtctaaaa
ggtcaggatgagcagagggagggcctcctcacttccctctacagccaggtgcagcagatt
gtaacgaactggcgggaggaccagtaccaggacgactgcaaggccaagcagatgatgcat
gaggcgctgaagctgcggcttaatctggtgggtgggatgtttgacacggtacaacgcagt
acacagcagaccacggagtgggccgtgctactcctcgacatcattagcagtggtacagtg
gacatgcagtccaacaatgagctcttcaccacggtactagacatgctgagtgtgctaatt
aatggcacgctggctgctgacatgtctagcatctctcagggcagcatggaggagaacaag
agggcttacatgaacctggtcaagaagctccggaaagagctgggtgaccggcagtcagag
agtctggagaaggtgcggcagctgctccctctgcccaagcagacccgtgatgtcatcacg
tgtgaaccacagggctcgcttattgacaccaagggcaacaagatcgctggctttgagaag
gagggtctccaagtgtcgaccaagcagaagatctctccgtgggatgttttcgagggcctc
aagcactcggcccctctctcctggggctggtttggtacggtgcgcgtggaccgtaaggtg
accaagttcgaggaacagcagcgcttcctcctctaccacacccacctgaagcccaagccg
cgcagctactacctggaacccctccccctgccccctgaggatgaggagccgcccacgccc
gcaccccaggaacccgagaagaagatggcggagccagtgaagccggagaagagcgtctct
gtggtgtcgtccgattcaaccaagaagaagaccaagaagaagaagacaccgtccaccaac
aagactgaggactatgtgacccgtacccagggtggagtgtcgtatggaacgtgtataccc
ccagacaccctcataggccagcaggcccacccctacagcaggataggctacaaccagcag
cccatgggcatgtatgcccagaaccagcctctgcctccaggaggccctggtttggacacc
ccgtaccgaccagcccggaaccctcaaatgggcaagatgatgcccacgcggcccagctac
ccaggcatgatgcccggcatgcaaggtggcatgccaggcatgatgggcatggacaagcag
tacccgatgggctacaagccccaacccaacattccgcagggtcagattctgcgccagcag
ctacaggtcagactgaaccagagtatgataggaccacagatgaggcagatgacgcctaac
caacaatacagctccatgcagccaagtcagaacatctcccagggatataccacgtacggc
tcccacattgggatgcagccacacccctctcaggcgggtggtatagtccctccatcgtat
gggaaccagggcttccagggaagccacccgggggccaacccggccgtggtggactctctg
aggcagaggcccagcggctatgttcaccagcaggcaccaggctactcacacaccatgcag
aacacaccaaggtttccccaccagtccatccagccagctcccgtcatgcagcccctgagc
cacatgggggtccacccgggcatgagaccaaaccagatgctggccgagcagcagcagcaa
cagcagcagcagcagcaacaggttcagcagcagcagcaacaggttcagcagcagcagcaa
caggttcagcagcaacaggttcagcagcagcagcaacaggttcagcagcagcagcaggtt
cagcagcaacaacaggttcaacaacagcaacaagtccagccccaacaagttcaacaacaa
caacaacagcagcaacaacaacaacagcaggtagcgtcggcccagccccccggtacccag
gctcagaaccaggccctgggcatgcagcaacccatgttcccacgacaggggatgcagcag
actcagatgcagcagactcaacagcagcagcagaccgcagcactggtcaggcagctccaa
caacaactctcaaatacacaacccggacagaacaccaactcatattactga
DBGET
integrated database retrieval system
