Salvelinus sp. IW2-2015 (Arctic char): 111967316
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Entry
111967316 CDS
T05762
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A
KO
K23720
UV-stimulated scaffold protein A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111967316 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111967316 (uvssa)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
111967316 (uvssa)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
DUF1195
Motif
Other DBs
NCBI-GeneID:
111967316
NCBI-ProteinID:
XP_023848017
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Position
LG8:complement(5495134..5520700)
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AA seq
738 aa
AA seq
DB search
MEHAQRDKLSELVEELTTSGEPQLNPNKLKEVKKICKVSNDYIEHFYHLTMTQLAQEHAE
IRLSAFQMVSELFTRSHHFRVLLVDNFQEFLDLTVETDSDEPLPPPKEVARKLKTIAIKT
VQEWQATYGEAYKKLALGYHFLKQVKKVDFHDVQARTLAERKREEERQKRLERIYKDKVE
KATKEMEDASEEIEECLTEINNCMKLLLPVEFDLSDLDTSTPANNSTVSVSSVPNEKTST
SSDLDEQPCCSKDLELQREPKNPETSTATKTNEEKEEEDPSDEDSDMEDVLEEDAFIRNT
GLISHKYSLDLNLSTDLKLKETEENEAVVNTMKDLHKMLSTKHLPVVQYWVQVFTKAGVP
EPLLRRAIDLKSSLERALQKHEDLHIDYKARHRRVMKAPEGSDDDDDDFEEVPEKEGFEP
HIPDHLREEYGLELSPSTSVASKKPVQPPVKCPATGASHTLSRPRKRATDEEQDPTCAAA
TLRLFKQRLLPQPPSTSSAAGGHVDPTYQASDPSEDRDKAPVIPFGLDLYYWGEEQPTAG
KIIKNSSQHQFWVPNEVEEEVENKELAAQMKSRYITFAGRFQPVKHRCKTPMPNGALCER
QDRVKCPFHGLIIPRDELGKPTNPEDVVRLEKEEWKRREDQPDWRDPELMRDIELATGED
LGSSKTFRKGKKGKGKGKGKKKKYPNLSDLKKGVNTSRSRLEKKVFNPSSMRRVTDVMNK
MDKLKHAKFANQFNYALN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgcacaacgagataagttgtcagagctcgtggaagagttgaccacatctggg
gaaccacaactaaatccaaataaactgaaggaagtgaaaaagatatgcaaagtttccaac
gactacattgagcacttctaccacctgaccatgacgcagctggcccaggagcatgccgag
atccgcctgtcagccttccagatggtcagtgaactcttcacacgctcacaccacttcagg
gtcctgctggtggacaacttccaggagtttctggacctgacagtggagacggactcagat
gagcctctgccaccacccaaagaggtggcccgaaagctgaagaccattgccatcaaaact
gtgcaagaatggcaggccacttacggagaagcctataagaaactggccttgggctaccac
tttctcaagcaggttaaaaaggtggactttcatgatgttcaggccagaacactagctgag
aggaaacgagaggaggagagacagaaaagactggagaggatttataaagacaaagttgaa
aaggccaccaaggaaatggaagatgcctcagaagagattgaagagtgtcttacagagata
aacaactgcatgaagttgcttctgcctgtagagtttgacctcagtgacctagatacctca
accccagccaataattcaaccgtttctgtctcttctgtgcctaatgagaagactagcacc
tccagtgacctagacgaacagccctgttgtagtaaagacctggagctccagagggaaccc
aagaatccagagacaagtacagcaacgaaaaccaatgaggagaaggaggaagaggatcct
agtgatgaagacagcgatatggaggatgttctggaagaagatgcattcatacgcaacaca
ggactcatatctcacaaatacagcctggacctgaacctctccacagatttaaagttaaag
gagacagaggaaaatgaagcagtggtgaacaccatgaaggacctgcacaaaatgctcagt
actaaacacctgcctgtcgtccagtactgggttcaggttttcaccaaggcgggtgtgcca
gaaccgctcctcagacgtgccatagacttgaagtcgtcactggagagagctctccagaaa
catgaagacctgcacattgactacaaggccaggcatcgcagagtgatgaaagcgccggag
ggcagtgatgacgacgatgatgactttgaggaggttccggagaaggagggttttgaaccc
cacattccagaccatctacgggaggagtacggtttagagctgtccccctctacctctgtg
gccagtaagaagccggtgcagcctccagtgaagtgtcctgcaacaggagcctctcacacc
ctctccagacccaggaagagagccactgacgaggagcaggaccccacctgtgcagccgcc
acactccgcctcttcaagcagcgcctcctaccccagccacctagcaccagctctgcagca
ggaggtcatgtggaccccacataccaggctagtgaccccagtgaggacagggacaaagct
ccagtcatccccttcggtctggacctctactactggggagaggagcaacccactgcaggc
aaaatcatcaagaatagctcccagcaccagttctgggttcccaacgaggtagaggaagag
gtggagaataaggagctggctgcccagatgaagtccaggtacatcacgttcgctggccgc
ttccagcccgtcaagcacaggtgcaaaacccccatgcccaacggagccctctgtgaacgc
caggaccgagtcaagtgtcctttccatgggctgatcatcccacgagacgagctgggaaaa
cccaccaatccagaggacgttgtgcggctggagaaagaggagtggaaacgtagagaggac
cagcctgactggcgggaccctgagctgatgagagacatagagcttgccactggggaggac
ctggggtcctccaaaacctttaggaagggcaagaaaggcaaggggaagggcaagggcaag
aagaagaagtaccccaacctcagtgatctgaagaagggtgttaacacttcacgttccaga
ctagagaagaaggttttcaacccgagctccatgaggcgagtgacagacgtcatgaataaa
atggacaaattgaaacacgcaaagtttgcaaaccaatttaattatgcactgaattaa
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