Salvelinus sp. IW2-2015 (Arctic char): 111969627
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Entry
111969627 CDS
T05762
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6-like isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111969627
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111969627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
DUF3437
Motif
Other DBs
NCBI-GeneID:
111969627
NCBI-ProteinID:
XP_023851532
LinkDB
All DBs
Position
LG11:complement(471677..555547)
Genome browser
AA seq
3069 aa
AA seq
DB search
MHFSKLSWRFCVLGNKCREKAQCSATDALTGECCPDAVKVKRNMKIQKKDKQMSTTHSQK
YTPATAASNATAQNAQTPFPRGTLGSKDQIRDLGGGQTNHCMANSKHPRMGEAGTSSASL
SPCAPSSPLNSEEDDGGGGRWAKKKRKKKDKRGEPGSALQHKGLERDMKPNKKKEQKEGK
ELLLRNFKEPRKVKAPKEVKRGRKPKVQALPHPPSECKSAPSPSRQRGRKPRAQVFQGPV
PAEKKKKGKRKSEAVLQEPGERDNVTFLSALAIGGEESIDPLDNTKRRSGRQVKRRKYNE
DLDFKVVDDDGETIAVLGTGRIPALNAATITWQAEEPPEDEANVIEKILSVRTVKKEASP
EDATEESEEFYVKYRNFSYLHCKWATLEELEKDPRIQQKIKRFRTKHAQMKHIFVEPNED
LFNPDYIEVDRVLEVAITTDTETGEEVTHYLVKWCSLSYEEATWELQEDVDPVKIREFEE
IKRIPELKFVERPQPDKWGKLDKSKDYRNGNQLREYQLEGMNWLLFNWYNRKNCILADEM
GLGKTIQSITFLFEMFSMGLRGPFLIIAPLSTITNWEREFRTWTEINVIVYHGSQISRQM
IHQYEMYHKDQQGNVVLGGYKFHGVITTFEMIMADCPELKKIHWRCVVIDEAHRLKNRNC
KLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESLFLEEFGDLKTEEQV
KKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNMQKKYYRAILEKNFTFLAKGANQ
HNMPNLINTMMELRKCCNHPYLIKGAEEKILDSFRKTHSPDAWDFQLQAMIQAAGKLVLI
DKLLPKLIAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKV
DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI
TRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGAQQMTKIEVEDLLRKGAYGALMDEE
DEGSKFCEEDIDQILQRRTQTITIETEAKGSTFAKASFVSSGNRTDISLDDPNFWQKWAK
ITELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERPCRTRRFSER
SRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWQLGERDMEVLCRALLVYCVRHYMGD
DKIKSFIWDLITPAKDGHKQDLQNHSGLSAPVPRGRKGKKLKNQLSVPEMKHADWLVNCN
PEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGETAAQFLEGIHASKLEVALPDID
YIEIPAGWWDAEADKSLLLGVHKHGYERYNAMRADSELCFLERVGMPDVTALSAEQSGGE
VVADLTDSACKSDDVKDDPECNPEEGGVEKVDNKDETSSSNDAMDKHDSVGQDALSVEMI
QESFGQEGMELKGRPLWPAGPALTARLRRLITAYQRFMRREPLRHDFLLPEGLGAGLGTM
SWQLGEEIRRCTVAAAEPDPLFLEWQRRWVMMSEQRWTRREQADFYRTVSSFGVVYDPEK
KTFDWSPFRSFARLERKTDESLERYFSSFVSMCRTACRLPPRKDEGPLDHNLFVEPITEE
RAARTLYRIELLRKVREQVLRHPLLGSRLQLCRPSLYLPVWWECGKHDRDLLIGAARHGL
SRTDYYILNDPQLSFLDAHRNYVQKENHQGYQPSVHHAGMAPSPHHHPCCIYETGLGQCH
SPQPPEYGHPAIPSSLIHFHSHPNVHGHPPEIVGTGPGGSLGMVSGPREGFLVCPPLDES
LELASLQHEGLASDSLHGKSAKEAFNGFPFNSAQGGQSMLNSYGVQAELTSEQSADMDPI
ISGKLRSDVLVGSSEENGLMAPLLELEQELQAPWESTDHTGTADVVGMFNEADPILGAPA
LDTEFLDTEEQPGDGGREDGVLDDCLGIPSSQSGPGEPLPSSFMLFKNIDVSEEEPAAEH
TNLSASPLPSYIPPPHLSLSHMTLHPHHHNQGDVEQPEKLSDSDTVAHVPSPDEREAERD
VSFEFDKEEMSVDSPSLVGLEQGLDPSCIPCEDSLQEEPCYGMGMGSPVESCQVALERPG
EETLERDTPLGPVEEGLLEGQVEEPLGISPMDSQEEEPVDGPLEDFGKNKAPEGPFTGPL
EQYDVEPEADFEGPAEAESTLSEHTLPTVDATDTLPPSSSVPRPQPEPPLSPRVVGVTQI
KLEFPLDPESSESKSDILEPDSTVLTPKLEQTEVLLEVKDKIKEERPQTPASLVDSYVEV
AQFAVPMSMCEMPDSLQDVREPTIAQLLQEKALYSFSEWPKDRVIINRLDSICHAILKGK
WPSSSQQYDSPSSLANTCVPNIVHQRAGFISARVQPSQSLNFNIPAPPVTHLPKYKSRDA
GECSQGGWRLTSLPLLQERLVAPPYLPELKRGRRAFEYKAEVLSKQCHTGEKMPVTLSNR
GGALLLKGWQEAAMDLSKAGDLGIGGDAAATVGHMSHQVHPGARKLPAMQGSVGKDMAGI
LQAGLIHPVTGQIVNGNLRCDDAIMRRRRGRRRNVEAVDIGFVKSRGMHVQEKQVTSHSA
VSSTSSPPERPPGTSTPTLPEVVAIDREAANNGLMEWLRQNPNCSMEVPTFAPSPGSAIL
HSFVERPKQRRHRCKDPTKLDVNSLTGEERVPVVHRSTGRRLGGAMAPAIKELSRWLDEN
TEYCVAPDWADVVKHSGFLPEGKFTRILTEPVCRDQGPRRRGRRPRSEMPKPLLSESPMG
PLCMNGGLIGSMDLVSLQNLHNVQGIPLTSLMGFPHGFAVSAGEDAKNGLSMLPMMLHGV
HGAPHMFSVQGLMGLPPTCSASTSSSTAVVTTTAASSSAASSPSRGPGQASSSTGAEGSG
IQSGRERKREEKQQGAMGSHSIAAITTTTATSSSSGSHQAFNPFLIPGMSHGLLYPHMFL
PHGGIMALPGMPPADSSSSPKTKKKRTREEGVVVVVVEAGSHSHLQTNSGPPKKHSDGQT
GESTADQAGPEDREQMEDNIQEEGTGHDSHDPPEVNPKKSVEEERGTMEISLMEEKKLPE
EESVSRGVE
NT seq
9210 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttctaaactgtcatggcgtttttgtgtccttggaaataaatgcagggagaaa
gcgcagtgttcggcaactgatgctctgaccggcgagtgttgcccagatgcagtgaaggtg
aagagaaatatgaaaatacaaaagaaggacaaacagatgtccaccacccactcacaaaag
tacactccagctacagcagcctctaacgcaactgcccaaaatgcacaaactccatttccc
aggggaaccctgggctctaaggaccagatcagggaccttggtggtggtcagaccaatcac
tgcatggccaactccaagcaccccaggatgggcgaggcgggcaccagctcggccagcctc
agcccctgcgccccctcgtcacccctcaacagcgaggaggatgatggagggggcgggcgg
tgggcgaagaagaaacgaaagaaaaaagacaagcggggcgagcctggcagtgccttgcag
cacaagggcttggagagagacatgaaaccaaataaaaagaaggagcagaaagaagggaag
gagctgctgctgcgcaatttcaaggagcccaggaaggtgaaggcaccaaaagaggtgaag
agagggagaaaacccaaggtgcaggccctgccccatcctccttcagaatgcaagagcgcc
ccctctccttccagacagaggggccgcaaacccagagcgcaagtcttccaagggccggtc
ccagcggagaagaagaaaaagggcaagcggaaaagcgaggcagttctccaggagcctggg
gagagagataatgtgaccttcctgtccgcgctggccatcgggggagaggagagcatcgat
cccctcgacaacacgaagcgtcgctcggggcgacaggtgaagcgcaggaagtacaatgag
gacctggacttcaaggtggtggatgacgacggggagactattgccgtgctggggacgggc
cgtatccctgccctcaacgctgccactatcacctggcaggctgaggagccccctgaagat
gaggcaaacgttattgagaagatcctgtcggttcgaactgtgaagaaagaggcgtcccct
gaggatgcaactgaggagtccgaggagttctatgtcaagtacagaaatttctcctacctg
cattgtaaatgggcgacattggaggagttggagaaggaccctcgcatccagcaaaaaatc
aagcgcttcaggactaagcatgcccaaatgaagcacatattcgttgagccgaatgaagac
ctctttaaccctgactacatagaagtggatagagttctggaggtggccatcacgacagac
acagagacaggagaggaggtgacacactacctggtgaagtggtgctccctgtcctatgag
gaggctacatgggagcttcaggaagatgtggacccggtgaagattcgggagtttgaggag
atcaagagaatccctgaattgaaatttgtggaaagacctcagccagacaagtgggggaag
ctggacaaatccaaagactatcgaaacgggaaccagctgagagagtaccagctggagggc
atgaactggctgctcttcaactggtacaacaggaagaactgcatcctggctgacgagatg
ggcctggggaagaccatccagtccatcacgttcctctttgagatgttctccatgggcctg
cggggacccttcctcatcatcgcccccctttccaccatcaccaactgggagagggagttc
cgcacctggactgagatcaacgtcattgtctaccacggcagccagatcagtcgccagatg
atccaccagtatgagatgtaccacaaggaccagcagggaaatgtagtgttgggcgggtac
aagttccacggagtgatcaccacctttgagatgattatggccgactgcccggagctgaag
aagatccactggcgctgcgtggtcatcgatgaggcccaccgcctcaagaaccgcaactgt
aaacttctggagggcctcaagctcatgaacctggaacacaaggtcctcctgacaggcacc
cccctgcagaactcagtggaggagctctttagtctgctcaacttcctggagcccctacag
ttcccctcagagagcctcttcttggaggagtttggagatctgaagactgaggaacaggtg
aagaagcttcaggccatcctgaagcccatgatgctgcggcggctgaaggacgacgtggag
aagaacctggcgcccaaggaggagaccatcatcgaggtggagctcaccaacatgcagaag
aagtactaccgggccatcctggagaagaacttcaccttcctggccaagggggccaaccag
cacaacatgcccaacctcatcaacaccatgatggagctgcgcaagtgttgcaaccacccg
tacctgatcaaaggtgcggaggagaagatcctggatagcttcaggaaaacgcacagccct
gatgcttgggatttccagctccaggccatgattcaggcagcggggaagctggtgcttatt
gacaagctgctgccgaagctgattgctggcggccacaaggtgctggtcttctcccagatg
gtgcgctgcctggacatcctggaggactacctcatccagaggaggtacacctatgagcgc
atcgacggcagagtgcggggtaacctgcgccaggcagcgatcgacaggttctgtaaggtg
gactcggaccgctttgtgttcctgctgtgtacccgtgctgggggcctgggcatcaacctg
accgctgcagacacctgcatcatcttcgactcggactggaacccccagaacgacctacag
gcccaagctcgctgccaccgcatcggccagagtaaagcggtgaaagtgtacaggctgatc
accaggaactcctatgagagggagatgtttgataaagccagtctgaagctgggtctagac
aaggctgtgctgcaggacattaatcgaaagggcagcctcaatggggcgcagcagatgacc
aagattgaggtggaggacctgctgaggaagggggcgtatggcgcactgatggatgaggag
gacgagggctccaagttttgtgaggaggacatcgaccagatcttgcagcgccgcacccaa
actatcaccatcgagactgaggccaagggctccaccttcgccaaggccagctttgtgtct
tctggaaacagaactgacatttccctggacgatcccaacttctggcagaaatgggccaaa
ataaccgagctggagattgactccaaagcagagaaggagagcctggtgattgatacgcct
cgtgtgaggaagcagactcgtcactacaactcgttcgaagacgacgagctgatggagttc
tctgagctggacagcgactcagaagagaggccctgtcgcacccgccgcttcagcgagagg
agcagacgctacctccgcgccgaatgcttccgcgtcgagaagaacctgctcatattcggc
tggggtcgctggaaggacatcctgacccacgggcgcttcaagtggcaactgggtgagcgt
gacatggaggtgctgtgccgggcactgctggtctactgcgtgcgtcactacatgggcgat
gacaagatcaagagctttatctgggacctcatcacacctgccaaggatggccataaacaa
gacctgcagaaccattctggcctgtcggccccagtgcccaggggacgcaagggtaagaag
ctaaagaaccagctgagcgtgcccgagatgaagcatgcagactggcttgtcaactgcaac
ccagaggtagtgctacaggacgacagctacaagaaacacctcaagcagcactgcaacaag
gtacttctgagggtgaggatgctgtactacctcaaggcggaggtcctgggagaaactgct
gctcagttcctggagggcatccatgccagtaaactggaggtggcactgcctgatattgac
tacatcgagatcccagcaggctggtgggatgcagaggcggataagtctctcctcttagga
gtgcacaaacacgggtatgagcgatacaatgccatgcgggccgactcagagctatgcttc
ttggagcgggtgggcatgcctgacgtcacggcgctctcagccgagcagagtggaggagag
gtggtggctgacctcactgacagtgcttgcaaaagtgatgatgtgaaagacgatcctgaa
tgcaatcctgaggagggaggagtggaaaaggttgataataaggatgaaaccagctccagt
aatgatgcaatggacaagcatgacagtgttggtcaagacgcactctcagtggagatgatc
caagagagctttggccaggagggcatggagctaaagggtcgccctctgtggccggccggc
cctgcccttacggccaggctacgtcgcctcatcacggcctaccagcgcttcatgcggcgc
gagccgctgcgccacgacttcctgctacctgaagggctgggggcaggcctggggacgatg
tcctggcagctgggggaggagattaggcgttgcacggtggccgccgccgaacctgaccct
ctcttcctggagtggcagagaaggtgggtgatgatgtcagagcaaaggtggacacggcgt
gagcaagcagatttctaccgcaccgtgtcgtcgttcggtgtggtatacgacccggagaag
aaaacattcgactggagtcctttccgctcctttgcccggttggagaggaagaccgacgag
agcctggagagatacttcagtagctttgtgtccatgtgccgcaccgcctgcagattgccc
cccaggaaggacgaagggcctctggaccacaacctgtttgtggagcccatcacagaggag
cgagcagcacgcaccctctaccgcatcgagctgctgcgcaaggtcagggagcaggtgctg
cgccacccactgctgggctcgcgactgcagctgtgtcggcctagcctctacctgcctgtg
tggtgggagtgtggcaagcatgaccgcgacctcctgattggagcggcccgccacggcctc
agccgcactgactactacatcctcaatgacccgcagctatctttcctggatgcccaccgc
aactacgtccagaaggagaatcaccagggctaccaacccagtgtgcaccacgcaggcatg
gccccctcaccgcaccaccacccctgctgcatctatgagacgggcctcggccaatgccac
tctccccagccgccggagtacggtcacccagccatcccctcctcgttgattcacttccat
tctcacccgaacgtccacggtcacccgccagagatagtgggcacgggccccggtggcagc
ctaggtatggtgtctgggccaagggagggcttcctggtttgcccccctctggatgagtca
ttggaactggcatcactgcagcatgagggcctggcctcagattccctccatggcaagtct
gccaaggaggccttcaacgggttccccttcaactcagcgcagggcggccagagcatgctc
aactcgtatggtgtgcaggcggagctgaccagcgagcagtcggctgacatggacccaatc
atctcaggcaagctgcgcagcgacgtgctggtgggctcctcggaagagaatggccttatg
gcccccttgctggagctggaacaggagctgcaggcgccctgggagagcacggaccacaca
ggcacagcagacgtcgtgggcatgttcaacgaggccgaccccatcctgggggcaccagcc
cttgatacagagttcctggacacagaggagcagccgggagacgggggaagggaggacgga
gtgcttgacgactgcctaggtataccctcatcccagagcggcccaggggagccgctgccc
tccagtttcatgctgttcaagaacattgacgtgagcgaggaggagcctgctgcagagcac
acaaacctctccgccagcccgcttccttcctacatcccccctccgcacctgtcgctgtcc
catatgaccttgcacccccaccaccacaaccagggtgatgtcgagcagccagagaagttg
agtgactcggacactgtcgcccacgtgcccagccccgacgagagggaggcagagagggat
gtgtcctttgagtttgacaaagaggagatgtctgtggacagtccaagtctggtggggctg
gagcagggcctggacccctcatgtataccatgcgaggactctctccaagaggagccctgc
tatgggatgggaatgggctctccagtggagtcatgtcaggtggctctagagaggccagga
gaagagactttagaaagggacacgcccttagggccagttgaggaggggcttctagaggga
caggttgaagaacccttggggatatcgcccatggattcccaggaggaggaaccagtggat
gggcctctggaagacttcggtaaaaacaaagcaccagaaggaccattcacagggccgttg
gagcagtacgacgtagaaccagaagctgacttcgaggggcctgccgaagcagagagcact
ttaagcgaacacacactccccactgttgacgctacagacactctgcccccatcctcctca
gtccccaggccccagcctgagccaccactgtccccacgtgtggtgggagtgacacagatc
aaacttgagttccctctggacccagagagctctgagagcaagtcagacatactggagcct
gacagcactgtcctcacgcccaaactggagcagacagaggtgctgctggaagtgaaggac
aagatcaaggaggagaggccccaaactccagcctctctagtggacagctatgtggaggtg
gcacagtttgcagtccccatgtccatgtgtgagatgcctgacagtctgcaggacgtgcgg
gagcccaccatcgcccagctgctgcaggaaaaagccctctactccttctccgagtggcca
aaggatcgggtgatcatcaaccgcctggacagcatctgtcacgccatcttgaaggggaag
tggccctcttccagccagcagtatgactcccctagctctctggcaaacacctgtgtgcct
aacattgtgcaccagagggctggcttcatttcagccagggtacagccatcccagagcctc
aacttcaacatcccagcccctcctgtaacccaccttcccaagtacaagtcaagagatgca
ggggaatgcagccagggaggctggaggttgacatccttgcctctcttgcaggagaggctg
gtggcgccgccctatttgcctgaactaaagcggggtaggcgtgcgtttgaatacaaggca
gaggtgctcagtaagcagtgccacacaggggagaagatgcctgtaaccttgtcgaacaga
ggaggggcactgctgctcaaaggctggcaggaggcggccatggacctctccaaggccggg
gatctgggcattgggggtgacgcggcagccactgtaggccacatgagtcaccaggtccac
cccggtgcccgaaaactgcccgccatgcagggttcagtggggaaggacatggccgggatc
ctgcaggcaggtctcatccaccccgtcaccggccaaattgtcaacggcaacctgaggtgt
gacgacgcaatcatgcgccggaggagaggcagacggagaaacgtggaggcggttgacatc
gggtttgtcaagagcagaggaatgcatgtgcaggaaaaacaggtcaccagccattctgca
gtgtcgtccacctcctccccaccggagcgtcccccgggaacctccacccccaccctgcca
gaggtggtggccatcgacagagaggctgccaacaatggcttgatggaatggctgcgacag
aatcccaactgtagcatggaggtgcccactttcgcaccgtctcctggctcagcgattctg
cacagctttgtggagcggcccaagcagcggcggcatcgctgtaaagaccccaccaagctg
gacgtcaactccctaacaggggaagagagggtgccagtggtccacaggagcactggccgc
aggcttgggggtgctatggctccagcaatcaaggagctttcacgatggctggatgaaaat
actgagtactgcgtggcacctgactgggcagatgtagtgaaacactctggctttcttcct
gagggcaagttcacccgcatcctcactgagcccgtgtgccgcgaccagggaccccgccgc
cggggccgtcgtccccgcagcgagatgcccaagcccctcctctccgagtctcccatgggc
ccgctctgtatgaacgggggcctgatcggcagcatggacctggtcagcctccagaacctc
cacaatgtccagggcatcccactcacaagcttgatgggattcccccatggctttgctgtg
tccgccggtgaagacgcaaagaatggtctgagtatgctgcctatgatgctccacggcgta
cacggcgccccccacatgttcagtgttcaggggctgatggggttgccgcccacctgctct
gcttccacctcctcctccacggctgtagttaccaccactgcggcctcctcctcagcggcc
agtagcccctctcgaggccccggccaggcatcttcaagcacaggggccgagggctctggc
attcagtctggcagagagagaaagagggaggaaaagcagcaaggcgcgatgggcagccac
agcattgcggccatcaccaccaccacagcgaccagcagcagcagtggcagccaccaggcc
ttcaaccctttcctcattccggggatgtcccatggactgctgtaccctcacatgttcctc
ccgcacgggggcatcatggcgctgccaggcatgccgcctgcagactcctccagcagccca
aagacgaagaagaaaagaacaagggaggaaggggtggtggtggtggtggtggaggcaggc
agccacagccacttacagacgaacagtgggcctccgaaaaaacacagtgatggccagact
ggggagagcacggctgaccaggctgggccggaggacagggagcagatggaggacaacatt
caggaggagggcacgggacacgactcccatgatcctccagaggtaaaccccaagaagagc
gttgaagaggagagaggaacgatggagattagcttgatggaggagaaaaaactgcctgag
gaggagagcgtgtcaaggggggtagagtag
DBGET
integrated database retrieval system
