KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111970315
Entry
111970315         CDS       T05762                                 
Name
(RefSeq) protein polybromo-1 isoform X1
  KO
K11757  protein polybromo-1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111970315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salp03021]
    111970315
   03036 Chromosome and associated proteins [BR:salp03036]
    111970315
Transcription machinery [BR:salp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     111970315
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    111970315
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 111970315
NCBI-ProteinID: XP_023852751
LinkDB
Position
LG11:complement(36710928..36725490)
AA seq 1630 aa
MPMSSKRRRATSPSSSVSGGDFDDASSTPGSGRKRRRAFNVPTVDPIAVCHELYNTVRDH
KDDQGRLLCELFIRVPKRRNLPDYYEVVSQPIDMTKIQQKLKSEDYQDVEQLTADFQLMF
NNAKNYYKAESEEYKAACRLWELYVHIRNEFVQPGDGDEDDDDGEDMLDNPALSTEEETP
PSCLKEVLEQLLDAVVSYTDTSGRVISELFQKLPSKMHYPDYYAVIKEPIDLRAIAQRIQ
IGFYKSVTAMAKDVELLAKNAKTYNEPGSQVFKDANTIKKVFIQRKTEIDHAEPTKTSVR
IRNRRSAQGDRLSAITLALQYGSESDEDALLSGSVRYDEGESEAECLSSSMDMGNPVFQL
YEAVRGGRNSQGQLLSEPFLQLPSRKEYTDYYQQIKQPIALQQIREKMKNGEYQSVEQMD
XDLTLMFENAKRYNVPNSAIFKRALRLQQILLMKKRELLRRGDEEDQDSILSSDTGTGSA
TKKKSHKKNVKKNRMKALYAAVTEAREAGTNRRLCDLFMVKPSKKDYADYYKNIVILEPM
DLKTMEHNIRSERYATEEALMNDMRLMFRNARHYNEEGSQVYDDADILEKIVKDKRKELG
ASPEEGTDNMGSPKLKLRKSGASPKKSNKYLTPLQQRLNELYDAVRNYTDGRGRRISTIF
LRLPSRAELPDYYSTIKRPIDMERLRSHMAGGRYQDVDALVEDFALMFNNACTYNEPESL
IYRDALLLHRVLLETRRLQEGVEEGGSPPAVGPLVRELIRNLFMSVLGHQDEEGRCYSDS
XAEIPAQDPASPEKPLLNFDVIRANVERGRYRRLDVFQEHMFEVLEKARRLHRTDSEIFE
DAVELQQFFIKIRDELCKNGEILLSPALSYTSKHMHSDVEQEKREKLPKEMEEDKLKREE
ENKEEGEKAEDPAGGGVGPERMYSQDCSFENSTYHVGDCVYVQPAEANRKPHIVCIERLW
EDEAGEKWLYGCWFYRPGETFHLTTRKFLQQEVFKSDYFNKVLVSKILGKCMVMFVKDYF
KLQPEGVRPEDVYVCESRYSARNKAFKKIKLWAVPAAVRFVPRDVPLPVVRVASMYAKRD
QEKLLAVADNGSRSIVDKEREDVPVEMTGGDPGCQYYDQLHYNNIWLKVGDCVYIQSHEL
IKPRIGRIEKLWVRDGAAFFFGPIFIHPEETEHEPTRMFYKREVFLSNLEETCPMTCVIG
KCVVSSFKDYLSCRPTEVSEEDVLLCESRYIESEKQMKKFKGLKRFSLHAKVVDDEVYYF
RKLIVPQKEPSPLLNKKIEELEMKLADMDEGDEDLNDLEDEDEAPETPSMPIMQTPLASD
LDIMPYTPPQSTPKVKGVSKKDGAKRKMNMSGYILFSSEMRSVIKTRHPDFSFGELSRLV
GTEWRNLEAPKKVEYEERAARVVEQQERERAAQQQASPRAGTPVGAMMGMTPGPGMMGSY
GPPYGMPMQGPYEGLLGMGPMPPHHMGSMPPQHFQPGMPGYHPGMPHPGMMGPGMNGMQG
SPGGHHYMQQPGMQAPPPYPGIGQLGQPSHLQPTTPMFVAPPPKTQRVLHSEAYLKYIEG
LNAENNTVSKWDQSLKARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRD
SLNIRQAYNL
NT seq 4893 nt   +upstreamnt  +downstreamnt
atgccaatgagttcgaaaagaagaagggccacctctccctccagtagtgtgagcggaggg
gactttgacgatgcatcctccactcctggaagcggacgaaagagacgaagagcctttaat
gttcctacagtagaccctattgctgtgtgccatgagttgtacaacactgtcagggaccac
aaggatgaccaggggaggctgctttgtgagctgttcatcagggtaccaaagagaaggaac
ctgccagactactatgaggtggtgtcccagcccatagacatgaccaagatccagcagaag
ctcaagtcagaggattaccaagatgtggagcagctcactgctgatttccagcttatgttc
aacaatgccaagaactactataaggctgagagtgaagagtacaaggcggcctgcaggctg
tgggaactctacgtccacatcaggaatgagtttgtgcagccaggggatggtgatgaagat
gatgacgatggtgaagatatgctggataatcctgctctctccactgaagargagactcca
ccgagctgcctgaaggaggttttggagcagctgttggatgctgtggtgtcatacacggac
acatcaggacgggtcatcagtgagctctttcagaagctgccttccaaaatgcactaccca
gactactatgccgttatcaaggagcccattgatcttagagccatcgctcagagaatacaa
attgggttctacaaaagtgtcaccgccatggccaaggatgttgagcttctggcgaaaaat
gcaaaaacatacaatgaaccaggatctcaggtttttaaggatgctaacaccatcaagaag
gtctttatccagagaaagactgagatcgaccatgctgagcccactaagaccagtgtccgc
atcaggaaccggaggtcagcccaaggagaccgtctctctgccatcactctggcgctgcag
tacggctcagagagtgacgaggacgccctgctctctggctctgtgcgttatgacgagggt
gagtctgaggcggagtgcctgagctccagtatggacatgggtaacccagtgttccagcta
tacgaggctgtgagggggggcaggaacagccagggacagctcctctctgaacccttcctc
cagctgccctccaggaaagaatacactgactactaccagcagatcaaacagcccatcgcc
ctccagcagatcagggagaagatgaagaacggggagtaccagagcgtggagcagatggac
tstgacctcactctgatgtttgagaacgctaagcgctacaacgtgcccaactcggccatc
ttcaaacgggccctgcggctgcagcagatcctgctgatgaagaagagggagctgttgagg
agaggtgatgaagaggatcaggacagcattctgtcctctgacacaggaactggcagtgct
accaagaagaaaagccataagaagaatgtgaagaagaaccgtatgaaggcactgtatgct
gcagtgactgaagccagagaggcagggaccaaccggaggctctgtgatctgttcatggtg
aagccctccaagaaggattacgcagactactacaagaatatagtgatcctggagcccatg
gatcttaagactatggagcataacatccgctcagagcgctacgccaccgaagaggccctt
atgaacgacatgaggctgatgttccgcaacgcacgccactataacgaggagggatctcag
gtttatgatgatgctgacatcctggagaagatagtgaaggacaagaggaaggagttagga
gcttctcctgaggagggcactgacaacatgggatctcctaagctcaaactaagaaagagt
ggcgcgtctcctaagaagtccaataaatacctgaccccgctgcagcagcgcctcaatgag
ctgtatgatgctgtgaggaactacacagacggcagggggcgacgtatctccaccatcttc
ctgcgccttccgtcccgcgccgagctgcctgactactactccaccatcaagaggcctatc
gacatggagcgcctgcgcagccacatggcgggcggccgttatcaggacgtggatgcactg
gtggaagactttgccctaatgttcaacaacgcctgtacctacaacgagccagagagcctg
atctaccgcgacgctctgcttctacaccgcgtgctcctggagacccgcaggcttcaggag
ggagtggaggagggtggctcgccccctgctgtggggccgctagtcagggagctgatcagg
aacctgtttatgtctgtgctcgggcaccaagacgaggaggggaggtgttacagcgactca
rtggctgagatccctgcccaggacccggccagcccagagaagcctctgctcaactttgat
gtgatccgggccaacgtggagcgaggacgctaccgcaggctggacgtgttccaggagcac
atgtttgaggtgctggagaaggccaggcgcctgcacaggacagactctgagatctttgaa
gatgcggtggagctgcagcagttctttataaagatcagagatgagctgtgtaagaacggc
gagatcctcctctccccggctctcagctacacctctaaacacatgcacagtgacgtagag
caggagaagagagagaaactacccaaggagatggaggaggacaaactgaagagggaggag
gagaataaagaggagggagagaaggctgaggacccagctgggggaggtgtggggccagag
aggatgtacagtcaggactgcagctttgagaacagcacctaccacgtgggagactgtgtc
tacgtgcagccagccgaggccaaccgcaagcctcacatcgtctgcatcgagcgcctgtgg
gaggacgaagcaggcgagaagtggctgtatggctgttggttctacaggcccggtgagacc
ttccatctgacaacacgcaagttcctccagcaagaggtcttcaagagtgactacttcaac
aaagtactagtcagcaagatactgggcaaatgcatggtcatgtttgtcaaggattacttc
aagctgcagcctgagggagtcagaccagaggacgtgtacgtctgtgagtcccgttattct
gccaggaacaaggcctttaaaaagatcaagctgtgggccgtgccagctgccgtgaggttt
gtccctcgggacgtgccgttgcccgtcgtccgggtggcctcgatgtatgccaaacgtgat
caggagaaactgctggccgtggctgataacggcagccgcagcatcgtcgacaaggagcgg
gaggatgtgccagtggagatgactggaggggatccaggctgtcagtactatgaccagctc
cactacaacaacatytggctgaaggtgggagactgtgtctacatccagtcacatgagctc
attaaaccacgcatcggcaggatagagaagctgtgggtgcgtgacggagcagcgttcttc
ttcgggcccatcttcatccacccagaggagactgaacacgagcccaccaggatgttttac
aagagagaggtgtttctcagcaacctggaggagacatgtcccatgacctgcgtcataggt
aaatgtgtggtgtcgtcctttaaggactacctgtcgtgtcggcccactgaggtgtctgag
gaggacgtgttgctgtgcgagagccgctatatcgagagtgagaagcaaatgaagaagttt
aaaggcctaaagcgcttctccctccacgctaaggtggtggacgatgaggtctactacttc
aggaagttgatagtgccccagaaggagccytctcctctgctgaataagaagattgaagag
ttggagatgaagctggcagacatggatgagggggatgaggatctgaatgacctggaggat
gaggacgaggctccagagactccctccatgcccatcatgcagacccctctggcaagcgat
ttggacatcatgccttacacccctcctcagtccacgcccaaggtaaagggtgtgtctaag
aaggatggagccaagagaaagatgaacatgagcggctacatcctgttcagcagtgagatg
cgttcagtcatcaagacccgccaccctgatttctcctttggggagctcagccgtctggtg
ggaaccgagtggaggaacctggaggctcccaagaaagtggagtatgaagagcgggcagcc
agggtggtggagcagcaggagagggagagggcagcccagcagcaagcatcccctagagca
ggtaccccagtaggggccatgatgggaatgacgcctggtccaggcatgatgggatcttat
ggccccccctacggtatgcccatgcagggcccctatgagggcttgctgggtatgggccca
atgccacctcaccatatgggctcgatgcccccccaacacttccagccaggtatgcctggg
taccaccctggcatgccccacccgggtatgatgggtcctggtatgaatggcatgcaagga
agtcccggaggccaccactacatgcaacagcctgggatgcaggcccctccaccataccca
ggcattggccagctagggcaaccctcccacctccagcccacgacccccatgttcgtggct
ccaccgcccaagacccagagggtgctccactctgaggcctacctcaagtacattgagggc
ctgaacgcagagaacaacactgtcagcaagtgggaccaatctctcaaagcacgtaggaga
gatgtccacctgtccaaagagcaggagagcaggctcccttcccattggttgaagagcaag
ggagcccacacgacgatggcagacgcactgtggcgcctgcgggacttgatgcttcgagac
tcactgaacatacgtcaggcgtacaacttgtag

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