Salvelinus sp. IW2-2015 (Arctic char): 111970315
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Entry
111970315 CDS
T05762
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111970315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111970315
03036 Chromosome and associated proteins [BR:
salp03036
]
111970315
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111970315
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
111970315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
111970315
NCBI-ProteinID:
XP_023852751
LinkDB
All DBs
Position
LG11:complement(36710928..36725490)
Genome browser
AA seq
1630 aa
AA seq
DB search
MPMSSKRRRATSPSSSVSGGDFDDASSTPGSGRKRRRAFNVPTVDPIAVCHELYNTVRDH
KDDQGRLLCELFIRVPKRRNLPDYYEVVSQPIDMTKIQQKLKSEDYQDVEQLTADFQLMF
NNAKNYYKAESEEYKAACRLWELYVHIRNEFVQPGDGDEDDDDGEDMLDNPALSTEEETP
PSCLKEVLEQLLDAVVSYTDTSGRVISELFQKLPSKMHYPDYYAVIKEPIDLRAIAQRIQ
IGFYKSVTAMAKDVELLAKNAKTYNEPGSQVFKDANTIKKVFIQRKTEIDHAEPTKTSVR
IRNRRSAQGDRLSAITLALQYGSESDEDALLSGSVRYDEGESEAECLSSSMDMGNPVFQL
YEAVRGGRNSQGQLLSEPFLQLPSRKEYTDYYQQIKQPIALQQIREKMKNGEYQSVEQMD
XDLTLMFENAKRYNVPNSAIFKRALRLQQILLMKKRELLRRGDEEDQDSILSSDTGTGSA
TKKKSHKKNVKKNRMKALYAAVTEAREAGTNRRLCDLFMVKPSKKDYADYYKNIVILEPM
DLKTMEHNIRSERYATEEALMNDMRLMFRNARHYNEEGSQVYDDADILEKIVKDKRKELG
ASPEEGTDNMGSPKLKLRKSGASPKKSNKYLTPLQQRLNELYDAVRNYTDGRGRRISTIF
LRLPSRAELPDYYSTIKRPIDMERLRSHMAGGRYQDVDALVEDFALMFNNACTYNEPESL
IYRDALLLHRVLLETRRLQEGVEEGGSPPAVGPLVRELIRNLFMSVLGHQDEEGRCYSDS
XAEIPAQDPASPEKPLLNFDVIRANVERGRYRRLDVFQEHMFEVLEKARRLHRTDSEIFE
DAVELQQFFIKIRDELCKNGEILLSPALSYTSKHMHSDVEQEKREKLPKEMEEDKLKREE
ENKEEGEKAEDPAGGGVGPERMYSQDCSFENSTYHVGDCVYVQPAEANRKPHIVCIERLW
EDEAGEKWLYGCWFYRPGETFHLTTRKFLQQEVFKSDYFNKVLVSKILGKCMVMFVKDYF
KLQPEGVRPEDVYVCESRYSARNKAFKKIKLWAVPAAVRFVPRDVPLPVVRVASMYAKRD
QEKLLAVADNGSRSIVDKEREDVPVEMTGGDPGCQYYDQLHYNNIWLKVGDCVYIQSHEL
IKPRIGRIEKLWVRDGAAFFFGPIFIHPEETEHEPTRMFYKREVFLSNLEETCPMTCVIG
KCVVSSFKDYLSCRPTEVSEEDVLLCESRYIESEKQMKKFKGLKRFSLHAKVVDDEVYYF
RKLIVPQKEPSPLLNKKIEELEMKLADMDEGDEDLNDLEDEDEAPETPSMPIMQTPLASD
LDIMPYTPPQSTPKVKGVSKKDGAKRKMNMSGYILFSSEMRSVIKTRHPDFSFGELSRLV
GTEWRNLEAPKKVEYEERAARVVEQQERERAAQQQASPRAGTPVGAMMGMTPGPGMMGSY
GPPYGMPMQGPYEGLLGMGPMPPHHMGSMPPQHFQPGMPGYHPGMPHPGMMGPGMNGMQG
SPGGHHYMQQPGMQAPPPYPGIGQLGQPSHLQPTTPMFVAPPPKTQRVLHSEAYLKYIEG
LNAENNTVSKWDQSLKARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRD
SLNIRQAYNL
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgagttcgaaaagaagaagggccacctctccctccagtagtgtgagcggaggg
gactttgacgatgcatcctccactcctggaagcggacgaaagagacgaagagcctttaat
gttcctacagtagaccctattgctgtgtgccatgagttgtacaacactgtcagggaccac
aaggatgaccaggggaggctgctttgtgagctgttcatcagggtaccaaagagaaggaac
ctgccagactactatgaggtggtgtcccagcccatagacatgaccaagatccagcagaag
ctcaagtcagaggattaccaagatgtggagcagctcactgctgatttccagcttatgttc
aacaatgccaagaactactataaggctgagagtgaagagtacaaggcggcctgcaggctg
tgggaactctacgtccacatcaggaatgagtttgtgcagccaggggatggtgatgaagat
gatgacgatggtgaagatatgctggataatcctgctctctccactgaagargagactcca
ccgagctgcctgaaggaggttttggagcagctgttggatgctgtggtgtcatacacggac
acatcaggacgggtcatcagtgagctctttcagaagctgccttccaaaatgcactaccca
gactactatgccgttatcaaggagcccattgatcttagagccatcgctcagagaatacaa
attgggttctacaaaagtgtcaccgccatggccaaggatgttgagcttctggcgaaaaat
gcaaaaacatacaatgaaccaggatctcaggtttttaaggatgctaacaccatcaagaag
gtctttatccagagaaagactgagatcgaccatgctgagcccactaagaccagtgtccgc
atcaggaaccggaggtcagcccaaggagaccgtctctctgccatcactctggcgctgcag
tacggctcagagagtgacgaggacgccctgctctctggctctgtgcgttatgacgagggt
gagtctgaggcggagtgcctgagctccagtatggacatgggtaacccagtgttccagcta
tacgaggctgtgagggggggcaggaacagccagggacagctcctctctgaacccttcctc
cagctgccctccaggaaagaatacactgactactaccagcagatcaaacagcccatcgcc
ctccagcagatcagggagaagatgaagaacggggagtaccagagcgtggagcagatggac
tstgacctcactctgatgtttgagaacgctaagcgctacaacgtgcccaactcggccatc
ttcaaacgggccctgcggctgcagcagatcctgctgatgaagaagagggagctgttgagg
agaggtgatgaagaggatcaggacagcattctgtcctctgacacaggaactggcagtgct
accaagaagaaaagccataagaagaatgtgaagaagaaccgtatgaaggcactgtatgct
gcagtgactgaagccagagaggcagggaccaaccggaggctctgtgatctgttcatggtg
aagccctccaagaaggattacgcagactactacaagaatatagtgatcctggagcccatg
gatcttaagactatggagcataacatccgctcagagcgctacgccaccgaagaggccctt
atgaacgacatgaggctgatgttccgcaacgcacgccactataacgaggagggatctcag
gtttatgatgatgctgacatcctggagaagatagtgaaggacaagaggaaggagttagga
gcttctcctgaggagggcactgacaacatgggatctcctaagctcaaactaagaaagagt
ggcgcgtctcctaagaagtccaataaatacctgaccccgctgcagcagcgcctcaatgag
ctgtatgatgctgtgaggaactacacagacggcagggggcgacgtatctccaccatcttc
ctgcgccttccgtcccgcgccgagctgcctgactactactccaccatcaagaggcctatc
gacatggagcgcctgcgcagccacatggcgggcggccgttatcaggacgtggatgcactg
gtggaagactttgccctaatgttcaacaacgcctgtacctacaacgagccagagagcctg
atctaccgcgacgctctgcttctacaccgcgtgctcctggagacccgcaggcttcaggag
ggagtggaggagggtggctcgccccctgctgtggggccgctagtcagggagctgatcagg
aacctgtttatgtctgtgctcgggcaccaagacgaggaggggaggtgttacagcgactca
rtggctgagatccctgcccaggacccggccagcccagagaagcctctgctcaactttgat
gtgatccgggccaacgtggagcgaggacgctaccgcaggctggacgtgttccaggagcac
atgtttgaggtgctggagaaggccaggcgcctgcacaggacagactctgagatctttgaa
gatgcggtggagctgcagcagttctttataaagatcagagatgagctgtgtaagaacggc
gagatcctcctctccccggctctcagctacacctctaaacacatgcacagtgacgtagag
caggagaagagagagaaactacccaaggagatggaggaggacaaactgaagagggaggag
gagaataaagaggagggagagaaggctgaggacccagctgggggaggtgtggggccagag
aggatgtacagtcaggactgcagctttgagaacagcacctaccacgtgggagactgtgtc
tacgtgcagccagccgaggccaaccgcaagcctcacatcgtctgcatcgagcgcctgtgg
gaggacgaagcaggcgagaagtggctgtatggctgttggttctacaggcccggtgagacc
ttccatctgacaacacgcaagttcctccagcaagaggtcttcaagagtgactacttcaac
aaagtactagtcagcaagatactgggcaaatgcatggtcatgtttgtcaaggattacttc
aagctgcagcctgagggagtcagaccagaggacgtgtacgtctgtgagtcccgttattct
gccaggaacaaggcctttaaaaagatcaagctgtgggccgtgccagctgccgtgaggttt
gtccctcgggacgtgccgttgcccgtcgtccgggtggcctcgatgtatgccaaacgtgat
caggagaaactgctggccgtggctgataacggcagccgcagcatcgtcgacaaggagcgg
gaggatgtgccagtggagatgactggaggggatccaggctgtcagtactatgaccagctc
cactacaacaacatytggctgaaggtgggagactgtgtctacatccagtcacatgagctc
attaaaccacgcatcggcaggatagagaagctgtgggtgcgtgacggagcagcgttcttc
ttcgggcccatcttcatccacccagaggagactgaacacgagcccaccaggatgttttac
aagagagaggtgtttctcagcaacctggaggagacatgtcccatgacctgcgtcataggt
aaatgtgtggtgtcgtcctttaaggactacctgtcgtgtcggcccactgaggtgtctgag
gaggacgtgttgctgtgcgagagccgctatatcgagagtgagaagcaaatgaagaagttt
aaaggcctaaagcgcttctccctccacgctaaggtggtggacgatgaggtctactacttc
aggaagttgatagtgccccagaaggagccytctcctctgctgaataagaagattgaagag
ttggagatgaagctggcagacatggatgagggggatgaggatctgaatgacctggaggat
gaggacgaggctccagagactccctccatgcccatcatgcagacccctctggcaagcgat
ttggacatcatgccttacacccctcctcagtccacgcccaaggtaaagggtgtgtctaag
aaggatggagccaagagaaagatgaacatgagcggctacatcctgttcagcagtgagatg
cgttcagtcatcaagacccgccaccctgatttctcctttggggagctcagccgtctggtg
ggaaccgagtggaggaacctggaggctcccaagaaagtggagtatgaagagcgggcagcc
agggtggtggagcagcaggagagggagagggcagcccagcagcaagcatcccctagagca
ggtaccccagtaggggccatgatgggaatgacgcctggtccaggcatgatgggatcttat
ggccccccctacggtatgcccatgcagggcccctatgagggcttgctgggtatgggccca
atgccacctcaccatatgggctcgatgcccccccaacacttccagccaggtatgcctggg
taccaccctggcatgccccacccgggtatgatgggtcctggtatgaatggcatgcaagga
agtcccggaggccaccactacatgcaacagcctgggatgcaggcccctccaccataccca
ggcattggccagctagggcaaccctcccacctccagcccacgacccccatgttcgtggct
ccaccgcccaagacccagagggtgctccactctgaggcctacctcaagtacattgagggc
ctgaacgcagagaacaacactgtcagcaagtgggaccaatctctcaaagcacgtaggaga
gatgtccacctgtccaaagagcaggagagcaggctcccttcccattggttgaagagcaag
ggagcccacacgacgatggcagacgcactgtggcgcctgcgggacttgatgcttcgagac
tcactgaacatacgtcaggcgtacaacttgtag
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integrated database retrieval system