Salvelinus sp. IW2-2015 (Arctic char): 111973475
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Entry
111973475 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: importin-4-like
KO
K20221
importin-4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111973475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salp03009
]
111973475
Ribosome biogenesis [BR:
salp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
111973475
Pre-60S particles
111973475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
IBN_N
RIX1
Cnd1
Vac14_Fab1_bd
UME
Maestro_HEAT
Adaptin_N
MMS19_C
UTP20_N
Xpo1
DUF3385
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
111973475
NCBI-ProteinID:
XP_023856616
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Position
LG14:26387436..26400764
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AA seq
1085 aa
AA seq
DB search
MSGELEQILLQLTQPDNAIIQQATAQLKLAFKDPAIIPALCAVMTGSQDSQIRQSAAVML
RMRVKKHWKKISPDHRESLKAVVLQAFQQETEHTVRHSLSQLSAVMVKHETPDRWPALFT
LLNQSTKSNNPMDRQVGLLLLSKVVESNPEPFKPHYRQLLQLFGTVLQDLDNPTALYLRI
LTLTSMTAYTGTEEMNLMRSLIPTLIIALRNLIKADQDQASEAMEVFDELMESEVSIMVP
HIAEIVHFCLEVSADTTLTDSLRVKALSCIAFLIRLKSKTVLKQKLLNPILQTVFPVLSA
APPPGEEDPEDEENSNEDDTDNESPKHFAAQVIDTMALHMPPEKLFHQLMPLTQACLASE
NPYERKAGLMCLAVLAEGCADHIRTKMLSSMLQTVCQSLSDSNQVVRSAGLFALGQFSEH
LQPEVSKYCAELMPLLLGYMSALNQAKIGHVTKAFYALENFLENLGSEIEPYLPTLMETM
LSALSNAENLKLKELAVSAIGAIANAAKEKLVPYFLPVIESLKGFLTDTRDEMRSLQTQA
LDTLSVLARTIGKEVFSPLAAECVQLGLNLTNAIDDPDLRRCTYSLFSAVSTVSPDCLNP
HLTAITTIMLLSLKSTEGVTAHLEEDKTFVLLDDDDDDEXQGDTILDEEGTDTVDPDIAG
FSVENAYIDEKEDTCDALGEIAFNTGAAFQPFLESSFQQVYELRDFPHEDVRRAAFVAMG
QFCRAQHKVWQENPTEADHQALQKLLGVVLPSFLEAVHSERERQVVMGVLEAMNAVLKAC
QGEALQSPGRLQEISQAIRDVLKKRTVCQDGGGDEADDDEQQAEYDAMLQEFAGEGIPLL
ASAVPAETFQPYLNELLPLIMNKAKLSYTVADRSFSVGTLGEILQSLVNVSGGRACAGKL
SNQLLPVLVAGVRDSDSEVRNNSVFALGALAQAAGPLVAQDYPMMLSLFSNLLSKEQDRR
VIDNLCAALCRMIMSNMEGVPLEQVFPALLARLPLKEDMEENKTVYSCLAMLYSQNPALV
LSQIKPIVSASSHVLGTKDLDTETQNTLVMLLQDVAQRHSQEFEVAMKSLPAEQKMKLTG
AVSQS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggaactagagcagattctcttacagctcacgcagcctgacaatgcgattatt
cagcaggccaccgcccagctgaagctggcttttaaagacccagccatcatcccagcgttg
tgtgctgtcatgactgggtcccaggactcgcagatccgccagtcagctgcagtaatgttg
cggatgagagtgaagaagcactggaagaagattagccctgatcacagagagagtttgaaa
gcagtggtcctgcaagccttccagcaggagacagaacacacagtgcgccactccctctcg
cagctcagcgcagtgatggtcaaacacgagaccccagaccgctggcctgctctattcaca
ctcctcaaccagtcgaccaagagcaacaacccaatggacagacaggtgggtctactcttg
ctcagcaaagtggtggagtccaatccggagcccttcaagccccactatcgccaactgctg
cagctgtttggcaccgtgctgcaagacctggacaaccccacagccttgtacttacgcatc
ctcaccctcacctctatgactgcctacactggcacagaagagatgaacctaatgcgctcc
ctcatcccaacactgatcattgctctcagaaacctcatcaaggcagaccaggatcaggcc
agtgaggccatggaggtgttcgatgagctgatggagagtgaagtgtccatcatggtccca
cacattgctgaaattgtccacttctgcttggaggtcagtgcagacaccactctgactgac
tccctgcgtgtgaaggctctgtcctgcattgcttttctcattcgtctcaagagcaagaca
gtgttaaagcagaagctgctcaatcccatcctgcagacggtgttccccgtgcttagtgca
gcgccaccacctggggaggaggaccctgaggacgaggagaacagcaacgaggacgacaca
gacaacgagagtcccaaacactttgctgctcaggttattgacaccatggctcttcacatg
ccccctgagaaactattccaccaactgatgccgctgactcaagcgtgtctggccagtgag
aacccctatgagaggaaagctggcctgatgtgtctggcagtgctggccgagggctgtgcc
gaccacatacggaccaagatgctctcgtccatgttgcagactgtgtgccagagtctgtca
gacagtaaccaagtggtccgcagcgccggcctctttgccctgggacagttttctgagcac
ctgcagcccgaggtcagtaagtactgtgctgagctgatgccactgttgctgggctacatg
tctgctctgaaccaggccaagatcggacacgtcaccaaggccttctacgccctggagaac
ttcctggaaaatctgggttcagagattgagccctacctgcccaccctgatggagacaatg
ttgtctgccctcagcaacgcagagaacctgaagctcaaagagctggctgtcagtgctata
ggagctatagccaatgcagccaaagagaagctagttccttacttcctgcctgtcattgag
agtctgaagggcttcctcactgacaccagggatgagatgaggtctctgcagacacaggct
ctggatactctgtcagtgctggcccgcaccataggtaaggaggtgttcagccccctggct
gcagagtgtgttcagctgggactcaatctcaccaacgccatcgacgaccccgacctgcgc
cgctgcacgtacagcctgttttcggccgtgtccacagtgagtccagactgtctgaaccca
cacctcactgccatcaccaccatcatgcttctgtctctcaagtccacagagggagtcacg
gctcaccttgaggaagacaagacgtttgtcctgctggatgacgatgatgatgacgagkct
cagggagacaccattttggatgaggaggggacggataccgtggacccagacatcgccggg
ttcagtgtagagaacgcctacattgatgagaaggaggacacctgtgacgccctgggagag
attgccttcaacaccggtgctgccttccagcccttcctggagtccagctttcagcaggtc
tatgagctgcgtgattttccccacgaggatgtgcgcagggctgccttcgtggccatgggc
cagttctgccgagctcagcacaaagtgtggcaggagaatcccactgaggccgaccaccag
gccctgcagaagctgctgggggtggtgctgccaagcttcctggaggcggtccatagtgag
cgtgagcgccaagtggtgatgggcgtgctggaagccatgaacgctgtgctgaaggcctgc
cagggggaggcgctgcagagccccgggcgcctgcaggagatcagccaggccatccgagac
gtgctcaagaagaggactgtctgtcaggacggaggaggagatgaggcagatgatgacgag
cagcaggcggagtatgatgccatgctgcaggagtttgccggcgaggggatccccctgcta
gcctctgccgtcccagcggagaccttccagccttatctcaacgagctgctgccgctcatc
atgaacaaggctaagttgtcgtacacagtggctgaccgttcgttctccgtgggtacgctc
ggagagatcctgcaatccctcgtcaacgtgtctgggggcagggcctgtgccggcaaactg
tccaatcagctgctgcctgtcctggtggctggggtgagagacagcgacagtgaggttcgc
aacaacagcgtgttcgcactgggagcactggcccaggctgctggacccctcgtcgcacaa
gactaccccatgatgctgtcccttttctccaacctgctgtctaaagaacaggacaggagg
gtgattgacaacctgtgtgctgccctctgcaggatgatcatgagcaacatggaaggtgtc
cctctggaacaggtgttccctgccctcctggctcgcctccctctgaaggaggacatggag
gagaataagactgtgtacagctgcttggccatgctctactctcagaaccctgcactggtc
ctgagtcaaattaagccaatagtatctgcttccagccacgtcctgggaaccaaggatctt
gacacagaaacccagaacaccctggtcatgctgctccaagacgtcgctcagcgtcactcc
caggaattcgaggtcgccatgaagtcacttcctgctgagcagaagatgaagctgacaggg
gccgttagccaatcctag
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