Salvelinus sp. IW2-2015 (Arctic char): 111974082
Help
Entry
111974082 CDS
T05762
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
salp01100
Metabolic pathways
Module
salp_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
111974082
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111974082
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
111974082
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
111974082
Glycosyltransferases [BR:
salp01003
]
Glycan extension
O-Glycan
111974082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
111974082
NCBI-ProteinID:
XP_023857380
LinkDB
All DBs
Position
LG2:complement(9456342..9470994)
Genome browser
AA seq
763 aa
AA seq
DB search
MRFAMFISLLRPIGPVIIGVSLGFTLSLLSVNWVEETCVLDGKASEEIRLAQXGNSKGAR
RPNSISTVDAEEDFEPRIVPYKPVQQSQTKQLFRAKYISTELGIRERLFVGILTSKSTIN
TMGVAVNRTISHHLDTVVFFTGMRNRKVPHGMFVVTHGDERLIWNIFQTIKYILEHYVHE
YDWFYLAQDDTYTEADRIKQLVDHLSIDRELYMGSPEEFIGGEMEGRYCYGGFGYXLSRT
LXLRLKPFLENCRNDILSARPDEWLGRCIIDYANTNCVDEHEGLQYYHYEMGKNSDPSKV
ENVQFKNALTVHPVSDPEQMYRLHKHFTEIELQRTYDEIEKLQAEIKNVSKVAFDGNRSA
QWPIGINPMFEPKSRFEVLRWDYFTEEQVYSCIDGSPKCELRGIDRLDVADVIEIAMGEL
NKKYKPVLHLKKQQLINGYRRFDPTRGMEYTLDLQLEVVNQKGHSRSITKRVHLVRPLSR
IEIIPMPYVTEATRVHIILPLTFQERGAVNHFLEVFATNLFETSENAXLTLLFIYDPFEA
QQVNQNDIFTGVKAQINAYERKYPAVKILWISVKTETPSQIKFMDXISKKHPVDTLFFIT
KVNTNVNSEFLNRCRMNSINNWQVFFPIHFQDYNPDIAFHNQEPPPTVDLVKDAGHFDRS
SFEEACFYNSDYMVTRTRMASDVQENEEIMETLDIYDMFVKYSILHVFRAVEPALHQKYR
HQACNPQLSEGIYHSCVQSNLDGLGSRSQLAMLLFEQEQGNST
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgcaatgtttatttctctgctgaggccgatcgggccggttattatcggtgtt
tctttgggatttaccttaagtttacttagtgtgaattgggtagaggaaacttgtgtcctc
gacgggaaagcgagtgaagaaatacgtttggcccaayatgggaattcaaaaggagcgagg
agacccaattcgatatcgactgtggatgccgaggaagattttgagccaagaatagtgcca
tataaaccagtccaacaaagccaaacaaagcaactttttcgggctaagtacatcagtaca
gagctggggatccgggagcgcctctttgtagggatcctgacgtccaaaagcaccatcaac
acaatgggagtggccgtgaaccgcaccatcagccaccacctggacactgtggtcttcttc
accggcatgcgcaaccgcaaagtgccccacggcatgttcgtggtcacccatggggacgag
aggctcatatggaacattttccagaccatcaagtacatcttggagcactatgtccatgag
tatgactggttctatctggcccaggacgacacctacacagaggcagaccggatcaaacag
ctggtggatcacctgagcatagaccgggagctttacatgggcagccctgaggagtttata
ggtggggagatggaggggaggtactgctacggtggmttcggatacktrctgtcccgtacc
ctgrtyctccggctcaaacccttcctggagaactgtaggaatgacatcctgagcgccagg
cctgacgagtggctgggcagatgcatcattgattatgccaacaccaactgtgtggatgag
catgaggggctgcagtactaccattacgagatgggcaagaactcggatccgagtaaggtg
gagaatgtgcagtttaagaatgccttgactgtccacccggtatctgaccctgagcagatg
tacagactacacaaacacttcactgaaatcgaacttcagaggacatacgatgagatcgag
aagctgcaggcagagataaagaatgtgagcaaagtggcttttgatggcaaccggagcgcc
cagtggcccattgggatcaatcctatgtttgagccgaagtctcgttttgaggtcctccgw
tgggactacttcacagaggagcaggtgtattcatgcattgacggctcccccaagtgtgaa
ctgcgtggcattgatcggttggatgttgccgacgtcatcgagatagccatgggggagctg
aacaagaagtacaagcctgtcctccacctgaagaagcagcagctgatcaacggttaccgc
cgctttgaccccactcggggcatggagtacaccctggacctycagctggaggtagtcaac
cagaagggccacagtcgctccatcaccaagagggtccacctggtgcgtcctctgagtcgc
atcgagatcatccccatgccttatgtcacagaggccaccagggttcatatcatcttaccg
ttgacttttcaggaacggggtgccgtcaaccattttctagaagtgtttgccaccaatttg
tttgagaccagtgaaaacgccatrttgactttactgtttatctacgacccattcgaggcc
cagcaggtcaaccagaatgacatattcaccggtgttaaagcgcagatcaatgcatacgaa
cgcaagtatccggcagtgaagatcctgtggataagtgtcaagacagaaaccccttctcaa
atcaaattcatggacatkatttccaagaagcacccagtagacacgctgttcttcatcacc
aargtcaacaccaacgtcaactccgagttcctcaaccgttgtcgcatgaactccatcaac
aactggcaggtgttcttcccaatccacttccaggactacaacccagacatcgccttccac
aaccaggagcccccacccacagtagacctggtcaaggacgccggacactttgaccgcagt
tctttcgaggaggcgtgcttctacaactccgactacatggtgacgcgcacgcgcatggcc
tccgacgtgcaggagaacgaggagatcatggagaccttggatatctacgacatgtttgtc
aagtactccatcctgcatgtgttcagggctgtggagccggctctgcaccagaagtaccgc
caccaggcctgtaacccgcagctcagtgagggcatctaccacagytgtgtccagagcaac
ctggatggcctgggatcccgttcccagctcgccatgctgttatttgaacaagagcaagga
aatagcacttga
DBGET
integrated database retrieval system
