Salvelinus sp. IW2-2015 (Arctic char): 111975394
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Entry
111975394 CDS
T05762
Symbol
wdr78
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 78
KO
K24723
dynein axonemal intermediate chain 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111975394 (wdr78)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111975394 (wdr78)
04812 Cytoskeleton proteins [BR:
salp04812
]
111975394 (wdr78)
Cilium and associated proteins [BR:
salp03037
]
Motile cilia and associated proteins
Dynein arm
111975394 (wdr78)
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
111975394 (wdr78)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
DUF896
Motif
Other DBs
NCBI-GeneID:
111975394
NCBI-ProteinID:
XP_023859431
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All DBs
Position
LG16:34630951..34646733
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AA seq
798 aa
AA seq
DB search
MSTTRAKLKKPTLKVTPSSRVMNVSTSGVLRVNHSSTYARSINASVSRKSFSLAADSKIL
DKSSVQTPKHTVQVFDENGKDVTPQPLYQPDPAAVMSKHSKIFASDTSGGTMSDFYSTAY
QTTTNASFAGPFTRSVFGSSTVSRGSQSTMESMNEEIEDPSSKRDISISLSDVQVRREEV
KELIKEEMLDDVVDRYLIESETLWLLHMPAVSVSVDSEEAESVKERNNLYMELCKNRMGN
DKYVERSMQTFNGAPKTKEVQSEAITMVDSATTATTWDMYDSFRSAGLGEAALSPDTDKA
SVPEIVSNHRLDPTRAPERTMSVISTTSIASASSSRIEMEPFVVPSEDEPDPELILQSEK
FQQDLFVMERIILENIYQPKLAAYRQLPTLEDPDSVPKVVPTVVSRREESSLDEESTLTP
ALERLWSFSCELTSGHNVSSMAWNKRNPDLLAVGYGQFDFKDQKSGLICCWSLKNPTWPE
RVFTCESGVTTLDFSASNASQLAVGMHDGSIATYNVESREKTPVIDSSDCAHKHTSPVWQ
VRWIDHERGASGEDKGETLISVSADGRISKWFLRKGLDCIDLMKLKRTRNEKAKKQVGDK
EKKXEALISRQAPGLCFDFHPTDSNIYLAGTEEGHIHKCSCSYNEQFLETYIAHKGPLYR
ITWSPFCSDVFLSCSSDWTIQLWRQDLFTPVLGFTSTQSAVYDVMWSPKCATVFGAVNEG
RVEIWDLGASILDPTIVSLASPGVKLTSLLFATETDCILVGDSDGQVSVYQLKNLTVGEG
TQVDALEDIIGSTLASQL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccagagcaaaactgaagaaacccactctgaaagttacaccatcttcccgg
gtaatgaatgtctcaacatcaggggtactccgggtcaaccacagctcaacatatgctcgg
agtatcaatgcctcagtgagccggaaaagtttcagtttggctgctgacagtaaaatcttg
gataaaagctctgttcaaacaccaaaacacacagttcaggtctttgatgaaaatggcaag
gacgtcaccccacagcctctctaccagccggaccctgcagcagtgatgtcgaaacacagc
aagatctttgccagtgacacctctggtggcaccatgtcagacttctactctacggcatac
cagacaacaaccaacgctagcttcgccgggccctttaccaggtcagtgtttggaagcagc
acagtgtccagagggagccagtccacgatggagtcgatgaatgaagagattgaggaccca
tcctccaaaagggacatctccatcagtctctcagatgtccaggtgaggagggaagaggtg
aaagagttgataaaggaggagatgttggacgacgtggtggatcggtacctcatcgagtca
gagaccctctggctactgcacatgccagctgtctctgtgtctgtggactctgaggaagct
gaatctgtcaaagagagaaataatctgtacatggagctgtgtaaaaacagaatggggaat
gataagtacgtggagcgttccatgcagacgttcaacggagctcccaagaccaaggaggtc
cagagtgaggccatcaccatggtggattcagccaccacagccaccacctgggatatgtat
gactcattccgcagcgcagggctgggggaggctgccttgtccccagacacagacaaggcc
agcgtcccagagattgtctccaaccacagactggaccccaccagagctcccgagagaacc
atgtctgtcatcagcaccactagcatagcgagtgcctctagctcgcggatcgagatggag
cctttcgtggttccgtctgaagatgaaccggacccggaactgattctgcagtcagagaag
ttccagcaggatctgttcgtgatggaaaggatcattctagagaacatctaccagccgaag
ctggctgcatacagacagctccccacattggaagatcctgacagtgtgcccaaggttgtg
cccacggtggtgagcaggagagaggagagttccctggatgaggagagcactctgaccccg
gccctggagcgcctctggtccttcagctgtgagctgacttcaggacacaacgtcagcagt
atggcctggaacaagaggaacccagaccttcttgcagtggggtatggacagtttgacttc
aaagaccagaaatcaggcctgatctgctgctggtctctgaagaaccccacgtggcctgag
agggtctttacctgtgagagtggagtgactactttggacttttcggcaagcaatgccagc
cagctagcagtggggatgcatgatggcagcatagccacctacaacgtcgagagcagagag
aagacacccgtcattgacagcagtgactgtgcccacaagcacacaagccctgtgtggcag
gtaaggtggatcgaccatgagaggggtgcctcaggggaggacaagggagagacactcatc
tctgtgtctgcagacggcaggatcagcaagtggttcctgcggaaaggcctcgactgcata
gacctgatgaagctgaagaggacgaggaatgagaaagccaagaagcaggttggagacaaa
gagaagaagaycgaggcactcatatcacggcaggcaccggggttatgttttgacttccat
cccacggactccaacatctaccttgctggtacagaagagggccacatccacaagtgttcc
tgttcctataacgaacagttcctggagacctacatagcacacaaaggccctctgtaccgg
atcacatggtctccgttctgctcagatgtcttcctgagctgctcctctgattggacgatc
cagctgtggcggcaggacctgttcactcccgtgctgggcttcacctcgacccagagtgcc
gtctatgatgtcatgtggtcccccaagtgtgccaccgtgtttggggccgtcaacgaggga
cgcgtggagatctgggacctgggagccagcatcctggaccccaccatagtgagcctggcc
agtcccggggtgaagctgacctccctgctgtttgctactgagacagactgtatcctagtg
ggggacagtgacggacaggtcagcgtctaccagctcaagaacctcaccgtaggagaggga
acacaggtggatgcgttagaggacatcatcggctccaccctggccagtcagctgtga
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