Salvelinus sp. IW2-2015 (Arctic char): 111975902
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Entry
111975902 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 13-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111975902
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111975902
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111975902
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111975902
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111975902
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111975902
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111975902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
111975902
NCBI-ProteinID:
XP_023860351
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All DBs
Position
LG16:complement(3370439..3430197)
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AA seq
839 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRXGDRVFKNECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGDEYECEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAASAYKKQEPESWDEEIQVSKHARSLRQQD
NGVRIPPSGWKCQKCEMKENLWLNLSDGAVLCGKWFFDGAGGNGHALDHFKDTNFPLAVK
LDNLTPDIADIYSFDEEEAVLDPQISEHLQHFGIDIIQIQRNGTDNGHHNTDNTNNVRPR
VSEWEVIQESGMKLKAVYGSGFTGIKNLGNSCYLGTIMQVLFSIPEFQRAYVGNLQRIYD
YSPLDPSTDFSTQMAKLGHGLLSGLYSKPPMKSELIEQVMKEEYKHQPKGISLKMFKALV
SNGHPEFSSNRQQDAQKFFLHLINLVEVCMYGFIRVFYKLFRYLVEERVQCCQXEEVRYT
QKVDYLMQLPXPIEAASNREELIAYEPSETKAEENMRAPPEPVRARIPFTACLQAFTEPE
NVPDFWSSELQAKSAGVKYLSIDIPDFLDLSRLRGTGLQAGEQELPDLTPPIVLPEDTRN
NSMNSSDSPEIDESAAVQLAEMGFPLEACRKAIYYTGNMGPEMAFNWIIAHMEEPDFAEP
LALPTFMDPGPSVASSGLAATPLDNHPPEESIGILTSMGFPRRHTVQALKATNNNLERAL
DWIFTHTEREEEETSDALSDMADTTEPNDSAFSNANTHSDSTLSPDQDASGPXIKDGPGR
YELFAFISHIGASTMSGHYVCHIKKEGRWVIFNDHKVCLSERPPKDLGYIYFYRRLSSS
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatctaggagagctgctggtcccttatatgcccaccatcagagttcccaga
wcaggagacagggttttcaagaatgaatgtgccttttcctacgattcgcccgagtctgag
ggaggcttgtatgtgtgtatgaacacattcctgggctttggcagagaacatgtggagaga
cattaccgtaaaacsggacagagcgtktacatgcatctcaaacgccatgtcaaagagaaa
gctacaggtgccgcagggggtgccatccccagaagaagaaatggaaaagtgttcctagat
ttagaactaaaccgtgattttaacggagatgagtatgagtgtgaagacgaggccaagctc
gtcatatttccagaccacttcgagatccccttaccaaatattgaggagttgcctgcactg
gtgacaatagcctgcgatgccgtgctcaacgctgcgtcagcctacaaaaaacaggagccc
gagtcctgggacgaggagatccaggtttccaaacatgccaggagtctccgacagcaggac
aacggcgtgaggatcccacccagtggatggaaatgtcagaagtgtgagatgaaagagaac
ctgtggctgaacctgtcggacggagcggtgctttgtgggaagtggttctttgatggtgcc
ggaggaaatggccacgccttggaccacttcaaagacactaacttccccctagccgtcaag
ctggacaacctcaccccagacatagcagatatttattcrttcgatgaagaagaagcwgtc
ctggacccgcaaatatccgaacacttgcaacactttggaatagacattatacagattcag
cggaatggaacagataacggccaccacaacacagacaacacaaacaacgtgcggccgcga
gtcagcgagtgggaggtgatccaggagtcgggcatgaagctgaaggcagtgtacggctcg
ggtttcacgggcatcaagaacctgggtaacagctgctacctgggcaccatcatgcaggtc
ctcttcagcatccctgagttccagagggcgtatgttggaaatctacagaggatatatgac
tactcacctcttgaccccagcacggacttcagcacacaaatggctaaactgggccacgga
ctcctctcaggcctgtactccaaaccaccaatgaaatccgagctcattgaacaggtgatg
aaagaagaatacaagcaccagccaaagggtatctctctcaagatgttcaaagccctggtt
agcaatggccacccagagttctcctccaacagacagcaagatgcacagaagtttttcctg
catctcatcaacctggtggaggtatgcatgtatggcttcatacgtgttttctataaactc
ttccgctacctggtggaggagcgcgtgcagtgttgccagnacgaagaggtgcgctacacc
cagaaggtggactacctcatgcagctcccgngccccatcgaggccgcctccaacagagag
gagctgatagcgtatgagccaagcgaaacgaaggcagaggagaacatgagagcccctcca
gagcctgtgagggcccggatccccttcacagcgtgcctgcaggccttcacggagccagaa
aacgtccccgacttctggagctcggagctgcaggccaaatcagctggagtcaagtatttg
tccatagacatcccagacttcctggacctgtctcggctccggggaacaggactgcaggcg
ggagaacaagagctcccagacctcacaccccccatcgtcctccctgaagacaccagaaac
aactcratgaactcctcagattctccagaaatagacgagtcggcggcagtgcagctggcg
gagatgggcttccctctggaagcctgtcggaaggccatctactacactgggaacatgggc
cccgagatggccttcaactggatcatagcccacatggaggagcctgactttgctgagccc
ctggcactgccaaccttcatggatcccggcccttccgtggccagctcgggcctggctgcc
acccccctggacaaccaccctccagaggagagcatcggcatcctcacctccatgggcttc
ccccgccgccacacygtccaggccctaaaagccacgaacaacaacctggagcgggcgctg
gactggatcttcacccacacggagagggaagaggaggagactagcgaygccctgtctgac
atggccgacaccacggagcccaacgacagcgccttctccaatgccaacacgcacagcgac
tccacactgtccccagaccaggacgcctcaggcccccrgatcaaagacggacccgggcgt
tacgagctttttgctttcatcagccacatcggagcgtccacgatgtctggtcattatgta
tgccacatcaaaaaggaaggaagatgggtgatcttcaatgaccacaaagtgtgtttgtca
gaaaggcctccaaaagacttgggctacatctacttttaccgtcgactgtctagcagctag
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