Salvelinus sp. IW2-2015 (Arctic char): 111976655
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Entry
111976655 CDS
T05762
Name
(RefSeq) agrin-like
KO
K06254
agrin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04512
ECM-receptor interaction
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111976655
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111976655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
salp00535
]
111976655
Proteoglycans [BR:
salp00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
111976655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
Laminin_EGF
SEA
CFAI_KAZAL
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
111976655
NCBI-ProteinID:
XP_023861426
LinkDB
All DBs
Position
LG17:complement(34871513..35137775)
Genome browser
AA seq
1989 aa
AA seq
DB search
MTSCHYPTPPPERDRMYQHKVSLVVRYFMIPCNICLILLATSTLGFAVLLFLNNYKPIHF
TPAQPPDDCRGMLCGFGSVCERDAADPSKTECVCKKMVCPSVVAPVCGSDSSTYSNECEL
EKAQCNTQRRIKVLRKGPCALEDPCSEVTCSYGSTCIQSSDSLSAKCMCPLSCDGKPEQV
VCGSDGQDYRNECELYKQACHTQKNFRLQHQGYCNPCKDSENSLNVACRVEPRTRQPLTF
APPESCPPVNEPLCASDSQTYESECHMTRTGMQKGIDLRKIHPGRCKKQEMCKVECKFNG
VCQVERLGVRCSCEPIQCDGTYKPLCGKDGRSYVNNCERRRAECLAKAHIPVKQQGPCDL
HAPSPCLAKACEFGAVCVVKNDKPVCECPEACIQTPDPVCGSDGHSYGSQCEMRATGCAL
QREIHIQHRGPCDEVCANCSFGAICDGQSGSCVCPQECVESHQPVCGSDGSTYDSECELN
VRACTKQLDLRVLAQGECKTCGSAVCAWGAQCIQNKCECTQCQGQAFSPVCGSDGMTYDN
TCELGLASCVLKKKIEVAKLGSCEEECGSGGSASGAESCEQDRCRTFGGSWDEDTEDDRC
VCDFDCSRVPRNLVCGSDGKTYSNECEMKKASCERQGHLLIQNQGPCTATSPPELTAPQR
CIQSVYGCCRDNKTAALGVGLAGCASTCQCNPYGSYKGTCDPASGQCSCKPGVGGQKCDR
CDPGFWNFRGIVTENLSGCTPCSCDAVGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDGSK
MGRSGCDTGADAPTSCNELDCKFGASCVEVNGQAHCECPSPDCDEKNKTKVCGSDGVTYA
DQCQLSTIACRRDKHIRVEHFGQCTESITEPASRPTPYPPTPRAKATTPSHVRLTSPHHG
TSYSPWDDDETEGPLASFVEALPPPMSTERPLTTNHPVITPHHPPHSTTPRLPSHTSPGS
SPTAFEDSGSGEPSGDDQVEEVEESSGVGVLEASGEEPVDPTAAATTIPTAEDRSSCDNT
PFGCCPDGKTASSSPEGANCPSTMRFSGFLHLDQVEGQEVFYTPEMEDPKSELFGETARS
IESALNELFRKSEVQKDFMSVQVRSLAPSNSILAFVEAHFDPETRLTVQDIEGALLKQMK
AAKETAIVVKKPEEENIRFNNYGLFSRPYFTTTTTATATTPTASTTLPPPNSPFITRRPL
GTILPPPNSPFITRRPLGTTLPPPNSPFITRRPLGTTRRPYTSRRTTAAPSTMAPTPTTT
ITLLHRTSPVPHYTKAQRPCDFHPCRHGGTCDDDGADFTCICPAGRGGAVCEKLITYFIP
SFGGKSYLAFDTMRAYHTVRIAMEFRVAEMTGILLFNGQDGKKDFLSLTLVNGKVELKFN
TGSGTGTLVSKVQVKQGRWYQLVVTRNRRNAVLSVDDELHIEGASPPGTDGLNLDTHLFI
GGVPEDMMTDVKERTSTGTGLVGCVRTLDVNNLVYNLQEKGGNVLYGTGVGECGNNPCQP
NPCKNSASCQVKEAEMFHCKCLNSYSGPTCADTHNPCEPNRCHPSSQCQVQPEGGYKCEC
PMGREGRHCEQVSDKKGTYMPSFSGDSYLELKGLHTYGHALHQKVSMTVVLMANESNGMI
FYNGQKTDGKGDFISLSLNDGILEFRYDLGKGPAVIRSKDKIKMGVWNTVNLERASRKGE
ININGKDPVRGESPNQHTALNLKESLFVGGAPDFSRLARAASLKDGFNGAIQKITLMGTS
ILRQENALHSSDVAMFKGHPCSREHCHNGGLCNPMLESYECVCPHGFTGTACQNTILEKS
AGETESIVFDGLTFIEYHNAVTKSEKALLVNKFELSIKTEATQGLVLWSGKGVERSDYIA
LAIVDGRVQMTYDLGSKPVVLRSTVRVNTNSWICIKASRALRDGSLQVGNEAAVTGSSPL
AATQLDTDGALWLGGLKELMVAPRLPKAYSTGFVGCVKNVVVDGRELHLVEDALNSPKIL
HCSAAEAKK
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctgccattaccccacgccgcccccggagcgggacaggatgtaccaacacaag
gtgtccctggtggtgcgatactttatgatcccctgtaacatatgtctcatcctgctggcc
acctccacgctgggcttcgccgtgctgctcttcctcaacaactacaaacctattcacttc
acaccagcccagcctcctgacgattgcagaggaatgctatgcggcttcgggtcagtatgt
gaacgtgatgcggctgacccctccaagacagagtgtgtctgtaagaagatggtgtgtccg
tcggttgtggcgcctgtgtgtggctcggactcctcsacctactccaatgagtgtgagctg
gagaaggcccagtgcaacacgcagcggcgcatcaaggtgctgcgcaaaggaccctgcgcc
ctggaggacccgtgcagtgaggtgacctgcagctacggcagcacctgcatccagtcatca
gactccttgtcggccaagtgcatgtgcccgctgagctgcgacggtaagcccgagcaggtg
gtgtgtggcagtgacggccaagactaccgcaacgagtgcgagctctacaagcaagcctgc
cacacccagaagaacttccgactgcagcaccagggatactgcaacccctgcaaagacagc
gagaacagtctgaacgtggcatgccgggtggagccacgtacccgccagcccctgaccttt
gcccctccggagtcctgcccacccgtcaatgagccactgtgcgccagcgacagccagacg
tacgagagcgagtgccatatgacgaggacgggcatgcagaagggcattgacctcaggaag
atccacccgggccgctgcaagaaacaagagatgtgcaaggtggagtgcaagttcaatggc
gtgtgccaggtggaacgtctaggcgtgcgctgctcctgcgagcctatccagtgcgacggg
acctacaagccgctgtgcggcaaagacggacgcagctacgtcaacaactgtgagcggcga
cgggccgagtgcctggctaaagcccacatccccgtcaagcagcaaggcccgtgtgatctg
cacgcgcccagcccgtgcctggcaaaggcctgcgagtttggcgctgtgtgtgtggtgaag
aacgacaagcccgtatgtgagtgccccgaagcctgcatccagacacccgacccagtgtgc
ggcagtgacggccacagctacggcagccagtgcgagatgagggccacgggctgcgccctg
cagagggagatccacatacagcaccgagggccctgcgacgaggtgtgtgccaactgttca
ttcggggcgatctgcgacgggcagtcgggcagctgtgtgtgcccgcaggagtgtgtggag
tcccaccaaccggtgtgcggcagcgacggatccacctacgacagcgagtgtgagctcaat
gtgcgcgcctgtaccaagcagcttgacctgcgtgtgctcgcccagggagaatgcaagacg
tgtggcagcgctgtgtgtgcctggggggcccaatgcatacagaacaagtgcgagtgcacg
cagtgccagggccaggctttttcgcctgtgtgtggcagcgacggcatgacctacgacaac
acttgcgagctgggcttggcatcctgcgtcctcaagaagaagatcgaggtggccaagctc
ggcagctgcgaagaagagtgtggttcaggagggtcggcctcaggtgctgagagctgcgaa
caggataggtgtcgtacgtttggaggctcgtgggacgaggacacagaggatgaccgctgt
gtctgtgacttcgactgcagtcgcgtgcctcgcaacctggtgtgtggctcagatgggaag
acctacagcaacgagtgtgagatgaagaaggccagttgcgaaaggcaagggcatctgttg
atccagaatcagggaccctgcacagccacctctccgccggagctgacagcgccacaacgc
tgcattcagtcagtctacggctgctgccgcgacaacaagacggcggcccttggtgtggga
ctcgctggatgcgccagtacgtgccagtgtaacccgtatggctcctacaaggggacgtgt
gacccggccagcggccagtgctcctgcaagcccggcgtcgggggacagaagtgtgaccgc
tgcgatccaggcttctggaacttccgcggcatcgtcacagagaacttgagcggctgcaca
ccgtgtagctgcgacgcggtgggctcggtgagggacgactgcgagcagatgtcaggcctg
tgctcctgcaagactggagtgaagggcatgaaatgcaacgtgtgccccgacgggagtaag
atgggcaggagcggctgcgacacaggtgctgatgccccaacctcatgtaatgagctggac
tgcaagtttggcgcgtcttgtgttgaggtcaatggtcaagcgcactgtgaatgcccctcg
cccgactgtgacgagaagaacaagaccaaggtgtgtggctctgatggggtgacctacgct
gaccagtgccagctgagcaccattgcctgtagacgggacaagcacatcagagtggaacac
tttggccagtgcacagaaagcatcaccgagccggccagccggcccaccccttaccccccc
accccccgcgcaaaagccaccaccccctcccacgtcaggcttacgtcgccgcaccatggc
acatcatactctccctgggacgatgatgaaaccgaggggccactagcctcattcgtggag
gccctgccgccccccatgtccactgagagaccgctcaccaccaaccaccccgtcatcacc
ccccaccacccacctcactccaccacccctcgcctacccagccacaccagccctggctcc
tcccctacagccttcgaggactcagggagcggtgagcccagcggagacgaccaggtggag
gaggtggaagagagtagcggcgtcggagtcctggaggcgagcggagaggagccagttgac
cccacagccgcagccaccaccatccccacagcggaggaccgctcgtcatgtgacaacact
cccttcggctgttgtcctgatggcaagacggcttccagcagccctgagggagccaactgc
ccctccaccatgcggttcagcggcttcctgcacttggaccaggtggagggtcaggaggtc
ttctacacccctgagatggaggatcctaagtctgagctgtttggcgagacggccaggagc
atcgagagtgctctgaatgagttgttccgtaaatcagaggtgcagaaggacttcatgagc
gtccaagtccgcagcctggcgcccagcaactccatcctggccttcgtcgaggcccacttc
gacccagagaccaggctcacggtgcaggacattgaaggagccctgctcaagcagatgaag
gcagccaaggagacagccattgtggtgaagaagccagaggaggagaatattcgcttcaac
aactatggcctgttctcccgcccctacttcaccaccactaccacagctaccgccaccacg
cccactgccagcaccaccctgccgccccccaactcccctttcatcacacgccgtcccctg
ggcaccatcctgccgccccccaactcccctttcatcacacgccgtcccctgggcaccacc
ctgccgccccccaactcccctttcatcacacgccgtcccctgggcaccacacgccgtccc
tataccagccgccggaccaccgccgccccttctaccatggcccccactcccaccactact
atcaccctcctccacaggaccagccctgtgccccactacaccaaggcccagcggccctgc
gacttccacccctgccgccacggcggcacctgcgatgacgacggcgccgatttcacctgc
atctgccccgccgggagagggggcgccgtctgcgagaaattgatcacatacttcatcccg
tcattcgggggtaagtcctatctggccttcgacaccatgagggcctatcacacggtccgc
atcgccatggagttcagggtggccgagatgacgggcatcctgctcttcaacggccaggac
ggcaagaaggacttcctgtctctcaccctggtcaatggcaaagtggagctcaagttcaac
accggctcgggcacaggcacactggtcagtaaagtccaggtgaagcagggtcgctggtac
cagctggtggtgacgaggaaccggcgcaacgccgtgctgagcgtggatgacgagctccac
atcgagggcgccagcccgcccggcaccgacggcctcaacctggacacccacctcttcatc
ggaggggtgcccgaggacatgatgacagatgtgaaggagaggacctccaccgggacaggt
cttgttggctgtgttcgcacgctggacgtcaacaacctggtgtacaacctgcaggagaag
ggtggcaacgtgctctacggcaccggcgtaggcgagtgcggcaacaacccgtgccagcct
aacccctgtaagaacagtgcctcctgccaggtcaaggaggctgagatgttccactgcaag
tgcctcaacagctactccggtccgacgtgcgccgacacccacaatccatgcgagcctaac
agatgccacccatcgtcccagtgtcaggtgcaaccagagggagggtataagtgtgagtgt
cccatgggccgcgagggacgccattgcgagcaagtgtcggacaagaaagggacctacatg
ccttcctttagtggcgactcttacctggagctgaagggactgcacacctacggtcacgct
ctccaccaaaaggtcagcatgacggtggtgcttatggccaacgaatccaacggcatgata
ttctacaatggccagaagaccgacggcaaaggggacttcatctccctctccctcaacgac
ggcatcctggagtttcgctacgacctaggcaagggcccagccgtcatcaggagtaaagat
aagatcaagatgggcgtgtggaacacagtgaatctggagagggccagtcgcaagggagag
atcaacataaacggaaaggacccagtcaggggagagtcgccgaaccaacacaccgctctc
aacctgaaggagtctctgttcgtgggtggtgctcctgatttcagccggctagcgagggcc
gcctcgctcaaagatggcttcaacggggccattcagaagatcaccctgatgggcacttcc
atcctgcggcaggagaacgcattgcactccagtgacgtggccatgtttaagggccacccg
tgcagccgggagcactgccacaacgggggtctctgcaaccccatgcttgagagctacgag
tgtgtgtgtccccacggcttcacgggcaccgcctgtcagaacaccatcttggagaagtcc
gcgggggagacggagtccattgtttttgacggcctgacttttatcgagtaccacaacgcc
gtcaccaagagtgagaaggccctgctggtgaacaaatttgagctgagcatcaagacggag
gccacacagggcctggtgctgtggagcggaaagggcgtggagcgctctgactatatcgcc
ctggccattgtggatggccgcgtgcagatgacctatgacctgggatccaagcctgtggtg
cttcgctcgacggtgcgcgtcaacactaacagttggatctgcatcaaggccagcagagca
cttagggacggatctctccaggtgggcaacgaggcagcagtcacgggatcgtcgcccctg
gcagccactcagctggacacagacggagctctctggttgggtggcctgaaggagttgatg
gtggcccccaggctgcctaaggcttacagcacgggcttcgttggctgtgtaaagaacgtg
gtggtggacggccgggagcttcacctggtggaggacgccctcaatagccccaaaatatta
cactgttccgccgctgaggccaaaaaatag
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