Salvelinus sp. IW2-2015 (Arctic char): 111978322
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Entry
111978322 CDS
T05762
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111978322
Membrane trafficking [BR:
salp04131
]
Protein recycling
Others
Others
111978322
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
111978322
NCBI-ProteinID:
XP_023864090
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Position
LG18:complement(39301659..39388992)
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AA seq
1101 aa
AA seq
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MYCFGRENRLTRHELSKNKVGASFRSRGRRRKRSFQTAESRATWSGFQWNSEDASTSGQH
DELKLISSTFALTGDSAHNQAMVHWSGQNSSVILMLTKYFDFSLGSVTESSLWRSTDYGT
TYEKLNEKVGPKTILSYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQRYHLAFDIL
SLLFHPEQEDWILAYGHDQKLYVSVEFGRRWQLVHESVVPNRFYWSKLGLDKEPGMIHLE
TSVSDRRSQYITCKLQNCSEANKGRPFPGFISPDSLVVQDQYVFIQVPMGGRPVHYVSYK
RNAFFPMKLPKYILPKDLQIISTDDNQVVAAVQDWHQNDSYNLYMSEARGLFFTLALENI
VSSGGPEGNIMIDLYEVAGIKGVFLSNKVVEGQVKTFITYNKGRDWHLLQAPTTDLKGTR
LYCVQPYCSLHLHLHVSDNPYTSGNIVSKESAPGIIVASGTIGPELTAYNVSIFITSDAG
NTWREVFEEEYSVLFLNQGGALVAIRHTPLPIRHIWLSFDEGKRWNKYSFTPSPLYVDGV
LGEPGEDTLIMIIFGHFSHRSEWQLVKIDFKAIFNRRCNPDDYQTWQLHNDGKVCIMGVK
RIFQNLKPDTRCVKTKDQYISQMSDSCPCTEADFECDYGFERQSDGGCTPVFWFVPSSVA
TDCTTGASFLNTTGYRKALSNNXTAVTLGKYSPRSQRCPRQAPRGLQLVTSEGTLTATMG
DNITFLVFLDESDGSTTSITLDFGDGTAMSYANISSIEDGVKHIYNKVGIYRVAATALNS
LGSERVLLYLHVTCLLEQVQLSAPSVVVRNEAVNLSTVLKPSYVGTVTYYWWFNNHTEPV
MTLVGGMSFTFSKEGTHTVTVQVSVGNTVLQDKITVAVYEHFKSHVLAFSSNLEAFNPGV
AEWRQDISRVVKDSMVQVTGISGEQLLVSVLPGLPTAAEFCIVPGKRSTEGRMDGKVTHL
EQLSLVLLSALNQDLIQFTLRPGVQINVYATRLSPAPIMDTSESGHNGATVIMLVSAVFV
GLAVFVIYKFKRKIPGINIHTNEREKQQEVIPSVVSIAVPNPEGDMVSTLEHLDTGPDAR
GIGYLPSHTDVKLSDETPHMF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgtattgttttggaagagaaaatagacttacacgacatgaattatcaaaaaacaaggtt
ggagcaagttttaggagccgtggaaggagacgaaagcgtagcttccagacggctgagagc
agagcaacttggtccggattccaatggaacagtgaagatgcctcaacctcggggcaacat
gatgagttgaaactcattagttctacattcgcactcaccggggattcagctcataaccaa
gccatggtgcattggtccggccaaaatagcagtgtgattctaatgctaactaagtacttt
gacttcagccttggcagtgtcacagagagctctctatggaggtcaacagactatggaacc
acgtatgagaaacttaatgaaaaggttggaccaaaaaccatactaagctacttgtacgtg
agtccgaataacaaacgaaagatcatgttactgaccgacccggaggtggagagcagcctg
ctcattagtcttgatgagggcgcatcctatcagaggtaccacttagccttcgacatcctc
agcctcctctttcaccccgagcaggaggactggatcctggcttacggccatgaccagaag
ctctacgtctctgttgaatttggaagaagatggcagctcgtgcatgagagtgtagtcccc
aacagattttactggtcaaaactgggtttggacaaagagccaggaatgattcacttggag
acaagtgtttctgacagacggtcccagtatataacgtgtaagctgcagaactgctcagag
gccaacaaaggcaggcctttccctggatttatcagccctgattccctggtcgttcaggac
cagtatgttttcattcaggtaccaatgggtggccggcctgtccattatgtgtcttacaaa
agaaatgctttcttcccaatgaagctacctaagtacatattaccaaaggacttgcagata
atcagcacagatgataaccaggtggtagcagcagtgcaggactggcaccagaatgactcc
tacaacctgtacatgtcagaggcccgaggactcttcttcactctggccctggagaacata
gtgagcagtggtggaccagagggcaacatcatgatagacctctatgaggtagcagggata
aaaggggtgttcttgtcaaataaagttgtcgagggccaagtgaaaacgtttatcacttac
aataaggggcgagactggcatcttctacaggctcctaccactgatctgaagggaaccaga
ctctactgtgtacagccctactgttcattacacctgcatctccatgtgtctgacaacccg
tacacgtctggaaacatagtcagtaaggaatcagctccaggaattatagtagcatcaggt
accattgggcccgagcttactgcctataatgttagcattttcatcacctcagatgctggc
aacacttggagagaggtatttgaggaggagtatagtgtcctctttcttaaccagggtggt
gccctagtggccattcgacacacacctctccccatcagacatatctggctgagttttgat
gagggaaaacgctggaacaaatacagcttcaccccctctcctctctatgtagacggagtc
ttaggagagccaggggaagacaccctcatcatgataatatttggccatttcagccatcgt
tctgagtggcagcttgtcaaaatagacttcaaggccatctttaacagaaggtgtaaccca
gacgactatcagacctggcagttacacaatgacggtaaagtctgcattatgggagtgaaa
agaatctttcagaatctgaagcccgacaccagatgtgtcaaaaccaaagatcagtacatc
tcccagatgtcagactcctgtccatgcaccgaggctgactttgagtgtgattatggcttt
gagaggcagagtgatggaggatgcacccctgtcttttggtttgttccatcctccgtggcc
acagactgcaccactggggccagcttcctcaacactactggataccgtaaggctctgtcc
aataactgractgcggtaaccctggggaagtatagccctaggagccagaggtgtccccgc
caggccccgagaggtctgcagctggtcaccagtgaggggacacttacagccaccatgggg
gacaacatcaccttcctggtgtttctggacgagagtgatggctccacaacaagtataaca
ttggactttggagatgggacggccatgtcctacgctaacatcagctccatagaggatgga
gtcaaacatatatacaataaagtgggcatttaccgagtggctgccacagcactcaacagc
cttggctctgagagagtcttactatatctacatgttacctgtctacttgagcaagtgcag
ctttcagctccctcggtggttgttaggaatgaagcagtgaatctatcaacagtcctaaag
ccaagttacgttggaacagtcacctactattggtggttcaacaaccacactgagcctgtt
atgactttagtgggaggaatgtccttcaccttctcaaaggagggaacccatactgtcacc
gtgcaagtgtcagttggtaacaccgtccttcaagacaaaataactgttgctgtctatgaa
catttcaagtcacatgttttagccttctcctctaatctggaggccttcaatcctggtgtg
gctgaatggaggcaagacatcagtagagtggtcaaggactccatggtccaagtcacaggg
atcagtggagagcagctgctagtgtcagtgctcccagggttgccaacggcagcagagttt
tgcatcgtccctggaaaaaggtcaacagaggggagaatggatggaaaagtgacacattta
gagcagctctctctagtcctgctaagtgccctgaatcaagacctcatccagtttactctg
cggcctggggttcagatcaacgtctatgccacacgactgtctccagctcctatcatggac
accagtgagagtggtcacaatggtgctacagtcattatgctagtgtcagccgtatttgtg
ggtttggcagttttcgttatctacaagttcaaaaggaagatccctggcatcaacatccac
acaaatgagcgagagaaacaacaggaagtgatcccttcggtggtgtctatagctgtccca
aaccctgagggggacatggtgagcactttggagcacttggacacagggccagatgcacgt
ggcataggatacctaccatctcacacagacgtcaaactctcagatgaaactccccatatg
ttttaa
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