Salvelinus sp. IW2-2015 (Arctic char): 111979967
Help
Entry
111979967 CDS
T05762
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111979967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111979967
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111979967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
MFS_1
Motif
Other DBs
NCBI-GeneID:
111979967
NCBI-ProteinID:
XP_023866431
LinkDB
All DBs
Position
LG20:36732396..36739907
Genome browser
AA seq
689 aa
AA seq
DB search
MSSREKRLIALISIVFCATAIFCLVLYYIPTLLYIAFILGVCCVACYYHSGESLYVSLGP
HPRRGLRIPPVLRRWLPGIANGVPTAGRVRSRTVKDDVRESVVFTGQRRFESAICRKDAG
HSDSFLLSPRDILMGSYIGKAESPPSVGRPRAGASSGANPNAREQLTLRERLARPNQAVS
TPNRRLSFGGEPLGTMGRFTITPQRHYPLQQTGTSSVGILPPNQWDGFRKKNILTPRNSP
AVHSPVTVKIARPDHNTTRSQLFDHXNSPGVLGSPGLGAPVDPCSRETVLSVLKESRKRV
VEDDRSFTAGQKSKRRRHDSSGSAHLAFEPLLPNGAPSQLVLNSLKRGLNAMVEESTMKR
SRTXSISSMSCGLTPSGTLGSVRNSIRSSLSSSQGVSQWKKASTRSLSPLSSPGSSRSQT
PERASKKPREEDARSPSSVSLARSDKTLTDPAPTTGKLSPAPEVPVASASSDSAGSGKRK
RKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLKEPEPEKPAPVVTT
SSKPPVSDNPTPTLLASHLTVSMPASVAAPIPVINLDPVPSSTVNTAPAYPVTNTPAANP
LLESLKMMRNNPLTSAAADNTTAVTTHVPLVPAEQKSKTNLTAPQLTLLSQPALPSLSQP
ALPSLSQPALPSLSQPALPSLSQPAXXTL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagagagaagcggttaatagcgcttatctctatcgtgttctgtgctaccgca
atattctgtctagttctctattatattccaacattgctttacatagcttttattcttgga
gtttgttgcgttgcctgttattatcacagcggagaatctctttacgttagtttaggccct
catccacgccgtggtctgagaattccacccgtgctgcgacgctggttgccagggattgca
aacggagtacccacagcgggaagagttaggagtcgcactgtcaaggatgatgttagggaa
tcagtagtatttactggccaacgacgtttcgagagcgctatttgtcggaaagacgcgggt
cacagtgactcatttcttctcagtcctcgggatatactcatgggaagttacattgggaag
gcagaaagtcctccctcagttgggaggccgcgagcgggtgcaagttcgggtgctaacccc
aacgcacgagaacagctaactttacgcgaaagattggcgcgacccaaccaggctgtcagt
actccaaacagacgtctgtcattcgggggggagccccttggcactatgggcaggttcacc
atcactccccagcgccactaccccctccagcagacgggcacctcctctgtgggcatcctg
cccccgaaccagtgggacggcttcagaaagaagaatattctcacccctcgcaactctccg
gcagtccacagtccagtcacagtgaagatcgctaggccagatcacaacaccactcgatcc
cagttatttgatcatttkaactccccgggagtccttggctctccaggcctgggggcccct
gtagacccctgctccagggagactgttctgagcgtgctcaaagagagtcgcaaaagagtg
gtggaagatgacaggagcttcactgcagggcaaaagagcaaaaggaggcgccatgacagc
agtgggagtgctcacttggcatttgagccactgctgcccaatggagctccatcacagctg
gtgctgaattctctgaagcgagggctgaatgctatggtggaggagtcaacaatgaagagg
tcacgcacctyctccatcagctccatgagctgtggcctaacycccagcggcaccctgggc
tcggtccgcaactccatccgcagctccctcagctcctcacaaggcgtttctcagtggaaa
aaagcctccacccgcagtctgtccccgctctccagccctgggtcgtcccggtcccagacc
ccagagagagcctctaaaaagcccagggaagaggacgctcgctcacccagctccgtgtcc
ttggcgaggtctgacaagacattgacagacccagcaccaaccactgggaagctgtctcca
gcccctgaagtccctgtggcttcagcctcgtcagactctgccggtagtgggaaacggaaa
cggaagattccgctggtgtccagccgtagaggrgaccaaatctctttgcctccacctcct
gagttgggctacaccatcacggtgaaagacctggatcaggagaagaaagctgctctcagc
cagatcaacacagtcctcaaagagcctgagccagagaagcctgctccagtagtgaccaca
tcttctaagcctcccgtgtcagacaaccccacacccaccctgctggctagccatcttacc
gtatcaatgcctgctagtgtggcggctcctatccctgtcatcaacctggaccccgtcccc
tcaagcaccgtcaacacggccccagcctaccccgtcaccaacacccctgcagccaacccc
ctcctggagtctctgaaaatgatgaggaacaaccccctcaccagtgctgctgctgacaat
actacagcagtgacgacccatgtaccactggtgcctgcagagcagaagtcaaagaccaac
ttgactgctcctcagctcacactactctcccagcctgcactaccctccctctcccagcct
gcactaccctccctctcccagcctgcactaccctccctctcccagcctgcactaccctcc
ctctcccagcctgcnnnnnctaccctc
DBGET
integrated database retrieval system
