Salegentibacter sp. T436: AO058_00170
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Entry
AO058_00170 CDS
T04614
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
salt
Salegentibacter sp. T436
Pathway
salt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO058_00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salt03019
]
AO058_00170
03016 Transfer RNA biogenesis [BR:
salt03016
]
AO058_00170
Enzymes [BR:
salt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AO058_00170
Messenger RNA biogenesis [BR:
salt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AO058_00170
Transfer RNA biogenesis [BR:
salt03016
]
Prokaryotic type
tRNA degradation factors
AO058_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
APS37393
UniProt:
A0A1L6QYQ2
LinkDB
All DBs
Position
56303..58552
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AA seq
749 aa
AA seq
DB search
MIPQTFKEVIDLGDGREISIETGKLAKQAHGSVVVQMGNAMLLCTVVSSYKESTMDFFPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRIVDRVLRPLFPSDYRTETQVMIQLMS
HDEEVMPDALAGLAASAAIQLSDIPFETAISEARVARINGEFVINPSRSQLLESDIDMII
GASSDSVMMVEGEMKEISEEEMAEAIQFAHEHIKKQIDAQLRLAEAFGKKPVREYATAEE
KEDIEKKVRDAAYDKIYEIAKGGHGKKERSEAFSAVKDEVLALFSEEELEENEKLIKKYY
SKTEKEAVRELTLAEGIRLDGRKTDEIRPIWCETDYLPSVHGSAIFTRGETQALATVTLG
TSREANTIDMPTHQGEETFYLHYNFPPFCTGEAYPIRGTSRREIGHGNLAQRALKGMIPE
NNPYTVRIVSEVLESNGSSSMATVCAGTMAMMDAGVKMKKPVSGIAMGLISDGERHAVLS
DILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLPYEILVKALKQARAGRLHILEKLTD
TIAEPNENVKAHAPKIITRRIPNEFIGALIGPGGKVIQELQKTTGTEIVINEDPVTEEGI
VEILGTKQEGIDKVLAKIESITFKPEKGSVYEVKVIKVLDFGAVVEYLDAPGNEVLLHIS
ELAWERTDNVTDILNVGDVIDVKYFGVDPKTRKEKVSRKALLEKPEGYQARPPRDNDRND
RGRDNRGSRDNRGHDDRRGRDNKDRRNND
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaaacatttaaagaggttatcgatttaggagatggaagagaaatctctatc
gaaaccggaaaattagcaaaacaggcccacgggtcggttgttgttcaaatgggcaacgcc
atgttgctttgtactgtagtatcttcttacaaagaaagtactatggatttctttccatta
actgtagattacagggaaaaatttgctgccgcaggtcgttacccaggtggtttctttaaa
agagaagcaagaccaagtgacggtgaagttttaacaatgagaattgtagaccgcgttttg
cgcccacttttcccatcagattatagaactgagactcaggtaatgatccagttgatgtct
cacgacgaagaagttatgccagatgctttggcaggacttgctgcttcggccgctattcag
ctttcagacattccttttgaaaccgctatttctgaagctcgtgtagccaggattaatggt
gaatttgtgattaacccaagccgcagccagttactggaatcagacatcgatatgattatt
ggtgcttcttcagattctgtaatgatggttgaaggtgagatgaaagaaatttcagaagaa
gaaatggctgaggctattcaattcgctcacgaacacattaaaaaacaaatagacgctcaa
ttgcgtttagctgaagcttttggtaaaaaaccggttagggaatatgccactgctgaagaa
aaagaagatatagagaaaaaagttcgcgatgcggcttacgataaaatttacgagattgct
aaaggtggtcacggtaaaaaagaacgtagcgaagctttttctgcagtaaaagacgaagtt
ttagctttattttctgaagaagaattggaagaaaatgaaaagctgatcaaaaaatattat
agcaaaaccgaaaaggaagcggtaagagaacttactcttgctgaaggtattcgtcttgat
ggtagaaaaaccgacgagattagacctatctggtgtgaaaccgattatttaccatcggta
cacggttcggctattttcactcgtggggaaactcaggctttggcaactgttactttggga
acttccagagaagcaaatactatagatatgccaacccaccagggtgaagaaactttctac
ctgcattataacttccctccattttgtacaggagaagcatacccaattagaggtacttca
agacgtgaaattggacacggaaaccttgcacaacgtgcattaaaaggaatgattcctgaa
aacaatccttacactgtaagaattgtttctgaagtattggaatctaacggttcttcttct
atggcaacggtttgcgcgggaactatggcaatgatggatgccggggttaaaatgaagaaa
ccagtttctggtatcgctatgggattaatttctgatggtgagcgtcacgctgtactttca
gacattcttggggatgaagatcaccttggtgatatggactttaaagtaaccggaacggct
gatggtattaccgcttgccaaatggatattaaagtaaaaggattgccttacgagatttta
gtaaaagcactaaaacaagctcgtgcaggtagacttcatattttagaaaaactgactgat
actatcgctgagccaaacgaaaatgtaaaagctcacgctccaaaaatcatcaccagaaga
attcctaacgaatttattggtgcacttattggacctggaggaaaagtaattcaggaactt
cagaaaactacaggaactgaaatcgttatcaacgaagatcctgtcaccgaagaaggtatt
gttgaaattcttggaactaaacaggaaggaatcgataaagttcttgctaaaattgaatct
atcactttcaaacctgaaaaaggaagcgtttacgaagtaaaagtaatcaaggtccttgat
tttggagctgtggtagaatatcttgatgctcccggcaacgaggttttacttcatatttct
gaactggcctgggaacgcaccgataatgttaccgatattcttaatgttggtgatgtaatt
gatgtgaaatattttggtgtagatcctaaaacccgtaaggagaaagtttcaagaaaagct
ttacttgaaaaacctgaaggttaccaggcaagaccacctagagataacgatcgtaacgac
agaggtcgtgacaatcgcggttctcgagataatcgtggccatgatgatcgcagaggcaga
gataataaagatcgtagaaataacgattaa
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