Salinivibrio sp. YCSC6: E8E00_04185
Help
Entry
E8E00_04185 CDS
T05946
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly00521
Streptomycin biosynthesis
saly00523
Polyketide sugar unit biosynthesis
saly00541
O-Antigen nucleotide sugar biosynthesis
saly01100
Metabolic pathways
saly01110
Biosynthesis of secondary metabolites
saly01250
Biosynthesis of nucleotide sugars
Module
saly_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E8E00_04185 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E8E00_04185 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E8E00_04185 (rfbC)
Enzymes [BR:
saly01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E8E00_04185 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCF35437
LinkDB
All DBs
Position
I:936923..937477
Genome browser
AA seq
184 aa
AA seq
DB search
MKVIETDIPDVKIIEPTVFGDERGFFMETWQQKKFEELVTGKPTQFVQDNHSKSKKGILR
GLHYQTQNTQGKLVRVTSGEVFDVAVDIRKSSPTFGKWVGIYLSAENKRQLWIPEGFAHG
FYVTSEEAEFVYKCTNYYDPSSEVSIKWDDPRVGISWPLKDAGVLLSEKDKFGLAFSEAP
HFIE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatagaaaccgacattccagatgtaaaaattatcgagcccactgtttttggt
gatgaacgcgggttttttatggaaacctggcaacaaaaaaaattcgaagaactcgttacg
ggaaagcctacgcagtttgtacaagacaaccactcaaaatccaaaaaaggaatcttacgt
ggcctgcattaccaaacacaaaatacacaaggtaagttagttcgagtgacttctggtgaa
gtgtttgatgtggcagtcgatattcgtaaaagctcgccaacgtttgggaaatgggttggt
atatacctatcggcggaaaacaaacgtcaactttggatccccgaaggatttgctcatggt
ttctacgtcacaagcgaagaggctgagtttgtttacaaatgtacgaactactatgaccct
agctctgaagtttccattaaatgggatgatccaagagtcggaatttcatggccgctaaaa
gatgctggcgttctactttctgagaaggacaaatttggcttagcattcagcgaagctcca
cattttattgagtaa
DBGET
integrated database retrieval system