Salmonella sp. SSDFZ69: EOS98_07845
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Entry
EOS98_07845 CDS
T06160
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
salz
Salmonella sp. SSDFZ69
Brite
KEGG Orthology (KO) [BR:
salz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salz03400
]
EOS98_07845
DNA repair and recombination proteins [BR:
salz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
EOS98_07845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA_16
UPF0547
SLFN-g3_helicase
zinc_ribbon_2
zf-tcix
AAA_22
AAA
DZR
Motif
Other DBs
NCBI-ProteinID:
AZY97513
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Position
complement(1607694..1609454)
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AA seq
586 aa
AA seq
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MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSVARNLDAFQEEFSLLIVDECH
RIGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGNDNALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIMEFAQTRKGVMIFAATVEHAKEIVGLLPVDDAALITGDTPGPERDALIDNFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDAILVDPDDMLKAALRLKDALVLRCSGMT
MQHGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITA
ADIVAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacactccgcccctaccagcaagaagccgtagacgccacgctcagccacttt
cgccgccaccgtacgcccgccgtgattgttctgccgaccggcgcaggtaaaagcctggtg
attgccgaactggcgcgcgtcgcccgcggacgggtactggtgctggcgcatgtgaaagag
ctggtcgcgcagaaccacgccaaatattgcgcgctggggctggaagcggatattttcgcc
gccggactcaaacgtaaagagagtcagggcaaagtcgtgttcggcagcgtacagtcggtg
gcgcgtaatcttgacgccttccaggaggagttttcgctgttgattgtcgatgaatgccac
cgcatcggtgacgatgaagacagtcagtatcagcaaatcctcactcacctgagtaaagtt
aatcctcacttacgtctgcttgggctcaccgccacgccttttcgcctcggaaaaggctgg
atttatcaatttcattatcacggtatggtgcgcggcaacgacaacgctctgtttcgcgac
tgtatttatgaactgccgctgcgctatatgattaaacacggctatctgacgccgcctgag
cggcttgatatgccagtggtccaatacgatttcagccgcctgcaggcccaaagcaatggg
ctgttcagcgaagccgacctgaaccgcgagctgaaaaagcagcagcggattacgccgcac
atcatcagccagattatggaatttgcgcaaacgcgcaaaggcgtgatgattttcgccgcc
acggtcgaacatgcgaaagagattgtcggtctgcttccggtggacgacgcggcgctgatt
accggcgatacgccagggcccgagcgcgacgcgctgattgataatttcaaggcgcagcgt
tttcgctatctggttaacgtctcggtgctgaccaccggctttgacgccccacacgttgat
ctcatcgcgattctacgtcccaccgagtcagttagtctttaccaacaaattgtcgggcgt
ggtctgcgccttgcgccgggaaagaccgattgcctgattcttgattacgcaggcaacccg
cacgacctgtatgccccggaggtcggtagcccgaagggaaaaagcgataacgtccctgtc
caggtattttgcccggcctgcggctttgccaacaccttctgggggaaaaccactgccgac
ggcacgctgattgaacactttggccgtcgctgccagggctggtttgaggatgacgacggc
catcgcgagcagtgcgattttcgctttcgcttcaaaaactgcccgcagtgtaatgccgaa
aacgatattgccgcccgacgctgccgggaatgtgacgccattctggtcgacccggacgat
atgttaaaagcggcgctcaggctcaaggatgcgttagtcctgcgctgtagcggaatgacg
atgcagcatgggcaggatgagaaaggcgaatggctgaaaatcacttactatgacgaggac
ggcgcggatgtcagtgagcgcttccgcttgcacacgcccgcccagcgtaccgctttcgaa
cagctatttattcgcccgcatacgcgcacgcccggcgttcctttacgctggatcacggcg
gcggatattgtcgcgcagcaggcgctgttgcggcatcccgattttgtggtcgcgcggatg
aaaggccagtactggcaggtgcgtgaaaaagtgttcgactatgaaggccgcttccgccgg
gcgcacgaattacgtggttaa
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