Salmonella sp. SSDFZ69: EOS98_09970
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Entry
EOS98_09970 CDS
T06160
Symbol
rsmF
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
salz
Salmonella sp. SSDFZ69
Brite
KEGG Orthology (KO) [BR:
salz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salz03009
]
EOS98_09970 (rsmF)
Enzymes [BR:
salz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
EOS98_09970 (rsmF)
Ribosome biogenesis [BR:
salz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EOS98_09970 (rsmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
TruB-C_2
TRM
Motif
Other DBs
NCBI-ProteinID:
AZY97881
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Position
complement(2014274..2015713)
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AA seq
479 aa
AA seq
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MAQHAVYFPDAFLTQMREAMPSTLSFDEFISACQRPLRRSIRINTLKISVADFLALIAPY
GWSLTPIPWCHEGFWIERDDEEALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNHPLR
VMDMAAAPGSKTTQIAARMGNRGAILANEFSASRVKVLHANISRCGIANTALTHFDGRVF
GAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNLDIAATQRELLNSAFHALRPGG
TLVYSTCTLNRQENEEVCLWLQETYADAVEFLPLGDLFPDADRALTPEGFLHVFPQIYDC
EGFFVARLRKMSSLPAMPAPGYKVGAFPFTPLKGREALHVTQAANAVGLLWDENLHLWQR
EKEVWLFPAEIESLIGKVRFSRLGIKLAESHNKGYRWQHEATIALACPTHAHAFELSAQE
AEEWYRGRDIYPQTPPAADDVLVTFQHQPLGLAKRIGSRIKNSYPRELVRDGKLFTGNS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaacacgctgtctattttcctgacgcttttctgacgcaaatgcgtgaagcaatg
ccttccacgctctcttttgatgaatttatttcggcctgccaacgcccgttgcgccgcagt
atacgcatcaatacgcttaaaatatccgtggctgatttccttgccctaatcgcgccctac
ggctggtcgctcacgccaattccgtggtgtcatgaaggattctggatcgagcgcgatgat
gaagaggcattgccgcttggcagtaccgctgagcatttaagcggcctgttttacattcag
gaagccagttcgatgctgccggtcgcggccctgttcgccgatgataatcatccgctgcgg
gtcatggatatggcagcggcgcctggctccaaaaccacgcagatcgctgcccgcatgggg
aaccgcggcgccattctggccaacgaattttcggccagtcgcgtcaaagttctgcacgct
aatatcagccgatgtggaatcgccaataccgcactgacgcatttcgatggccgcgtattt
ggcgctgcgttaccggagatgtttgacgctatcctgctggatgcgccctgctctggcgaa
ggcgtagtacgtaaagatcctgatgcgctaaaaaactggtcgccagaaagcaatctggat
atcgcggcgacacagcgggaactgctcaacagcgcttttcatgctttacgacccggcggc
acgctggtctactccacctgcacgttaaatcgccaggaaaacgaagaggtctgcctctgg
ctgcaagagacctacgccgacgccgttgaatttttgccgctgggtgatctgtttcctgac
gctgaccgcgccctcaccccggaaggcttcctgcacgtcttcccgcaaatttacgactgc
gaaggattcttcgtcgcacgtctgcgtaaaatgtcatcccttccagccatgcccgcgccg
gggtataaagtgggggcgtttccttttacccccctcaaaggccgcgaagcattacacgtt
acccaggcggccaacgccgtcggactgttatgggatgaaaatctccatctttggcagcgt
gaaaaagaggtctggctgttcccggcagagattgaatcactgatcggaaaagtccgtttt
tcccggctcggcattaagctggccgaaagtcataataaaggctatcgctggcaacatgag
gcgacgatagcccttgcctgcccgactcatgctcacgcgttcgaactctctgcgcaagag
gcggaggagtggtatcgcggtcgggatatttatccgcaaacaccccctgccgctgatgat
gtcctggtgacgttccagcatcagccgcttggtctggcaaaacgtatcggctcaagaata
aagaacagttacccgcgtgaactggtacgtgatggcaaactctttactggtaatagttaa
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