Streptomyces ambofaciens: SAM23877_5082
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Entry
SAM23877_5082 CDS
T04055
Symbol
kuA
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
samb
Streptomyces ambofaciens
Pathway
samb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SAM23877_5082 (kuA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_5082 (kuA)
DNA repair and recombination proteins [BR:
samb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SAM23877_5082 (kuA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AKZ58127
UniProt:
A0A0K2AZ76
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All DBs
Position
5387787..5388884
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AA seq
365 aa
AA seq
DB search
MRSIWNGAISFGLVSIPIKLMNATESHSVSFRQIHMEDGGRIRYRKVCELEDREVTQDEI
GKAYEDADGSMIPITDDDLTQLPIPTARTIEIVAFVPEERIDPLQMGSAYYLAASGAPAA
KPYTLLREALKRSNRVAIAKFALRGRERLGMLRVVGDAIAMHGLLWPDEVRAPEGVAPDA
GVTVRDQELDLADALMDTLGEIDLDDLHDEYREALEEVIAAKAAGETPRESPEPAAPGKV
LDLMAALEGSVRAARESRGGEGAGAAEGAEVRSLPRRAASARRTPKETGGKKSTSTAAKK
PAAKKAEAKKSTASATGKPAAKSGRAAKKTADPGTAKKATGKGATTRNTASKGTAKRTAP
RKRSA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatccatctggaacggcgccatctccttcggcctggtcagcatcccgatcaagctg
atgaacgcgaccgagagccactcggtctccttccgccagatccacatggaggacggcggc
cggatccgttaccggaaggtctgcgagctggaggaccgcgaggtcacccaggacgagatc
ggcaaggcctacgaggacgccgacggctccatgatcccgatcaccgacgacgacctgacc
cagctgcccatcccgaccgcgcggacgatcgagatcgtggccttcgtgccggaggagcgc
atcgacccgctccagatgggttccgcgtactacctcgcggcgagcggcgcgcccgccgcc
aagccgtacacgctgctgcgcgaggcgctcaagcgcagcaaccgggtcgccatcgccaag
ttcgcgctgcggggccgtgagcgcctcggcatgctccgggtcgtgggcgacgccatcgcg
atgcacggtctgctgtggccggacgaggtccgcgcccccgagggtgtcgcccccgacgcc
ggcgtcaccgtccgcgaccaggagctggacctcgcggacgcgttgatggacacgctcggc
gagatcgacctggacgacctgcacgacgagtaccgcgaggcgctcgaggaggtcatcgcc
gcgaaggccgccggcgagacgccgcgggagtctcccgagccggcggcgcccggcaaggtg
ctggacctgatggccgcgctggagggcagtgtgcgggcggcgcgggagtcccggggcggt
gagggggcgggagccgccgagggggccgaggtcaggtccctgccgcggcgcgccgcctcc
gcccggcggacacccaaggagaccggcggcaagaagtcgacgtcgacggcggcgaagaag
ccggcggcgaagaaggcggaggcgaagaagtccacggcctccgccaccgggaagccggcc
gcgaagtcgggccgggccgcgaagaagacggcggacccgggcaccgccaagaaggcgacg
ggcaagggcgcgacgacccggaacacggcctccaagggcaccgccaagaggacggcgccc
cgcaagcgcagcgcctga
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