KEGG   Streptomyces ambofaciens: SAM23877_6477
Entry
SAM23877_6477     CDS       T04055                                 
Symbol
cas
Name
(GenBank) CRISPR-associated endonuclease Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
samb  Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:samb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:samb03400]
    SAM23877_6477 (cas)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:samb02048]
    SAM23877_6477 (cas)
DNA repair and recombination proteins [BR:samb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     SAM23877_6477 (cas)
Prokaryotic defense system [BR:samb02048]
 CRISPR-Cas system
  Universal Cas proteins
   SAM23877_6477 (cas)
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: AKZ59522
UniProt: A0AE93
LinkDB
Position
complement(6986054..6987025)
AA seq 323 aa
MSSVSRRPALTPRQLTRTGERLSFVYLERCTVHRDANAITAQDAEGTTHIPSATIGTLLL
GPGTRVTHQAMSVLGETGAAVCWVGEHGVRYYASGRALSRSSALMEAQVRQWASQRSRLA
VARAMYRLRFPDEDPAGLTRHELLGREGKRVKDCYRTETARTGVTWRGRRYTPGDFTSGD
PVNQATTAAAQCMYGIAHAVVTSLGCSPALGFIHSGHELSFVLDVADLYKTEIGIPLAFD
VAAQDEEDTGPRTRRALRDRINETSLLNRCVDDIKRLLLPDTAGPTTAPGDDRDVVTLQS
DRGHQVASGINYDGPEDYGDDLW
NT seq 972 nt   +upstreamnt  +downstreamnt
gtgagcagcgtctcccggcgcccggcgctcactccccggcagctcacccgcaccggcgaa
cgcctctccttcgtctacctggaacgctgcacggtccaccgcgacgccaacgccatcacg
gcccaggacgccgaaggcaccacccacatcccctcggcgaccatcggcaccctcctcctc
ggccccggtacccgcgtcacccaccaggccatgagcgtgctcggagagaccggcgcggca
gtctgctgggtcggcgaacacggcgtgcgctactacgcctccggccgcgccctcagccgc
tcctccgccctgatggaggcccaggtccggcaatgggccagtcaacgcagccgcctcgct
gtggcccgagcgatgtaccggctgcgctttccggacgaggaccccgccggcctcacccgg
cacgaactcctcggccgcgagggcaagcgggtcaaggactgctaccgcaccgagaccgcc
cgcaccggcgtcacctggcgcggccgccgctacacccccggcgacttcaccagcggtgac
cccgtcaaccaggccaccaccgccgccgcccagtgcatgtacggcatcgcccacgccgtc
gtcacctccctgggctgcagcccggccctcggcttcatccactccggccacgaactgtcc
ttcgtcctggacgtcgccgacctctacaagacagagatcggcatcccgctcgccttcgac
gtggccgcccaggacgaggaggacaccggcccccgcacccgacgcgccctacgggaccgc
atcaacgagacgtccctcctgaaccgatgcgtcgacgacatcaaacgcctgctccttccg
gacacagcgggcccgacgaccgccccgggcgacgaccgggacgtagtcaccctccagagc
gaccgtggccaccaggtcgcctccggcatcaactacgacggccccgaggactacggggac
gacctctggtga

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