Sphingobium amiense: SAMIE_1007380
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Entry
SAMIE_1007380 CDS
T06684
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sami
Sphingobium amiense
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sami03400
]
SAMIE_1007380
Enzymes [BR:
sami01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAMIE_1007380
DNA repair and recombination proteins [BR:
sami03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAMIE_1007380
Prokaryotic type
SAMIE_1007380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBD97237
UniProt:
A0A494W3R0
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All DBs
Position
876057..877391
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AA seq
444 aa
AA seq
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MSDQAALLAAVKEGPVIPVYVLDDESPRDWAIGGASRWWLHHSLDALDRSLRAKGSRLIL
RRGRSADALEKLAKEVDARRVHALRHYEPWWRNAEKAVAKSLDLCLHDGGLLLPPGAVRT
GSGGIYRIYTPFSRAVMEQMPPAAPRPAPRLIGAPSAWPSSESLKEWALLPSKPDWASAF
ADDWTPGEEGARRNVADFLDEAGDYAEARNLPSLEGTSRLSPHLHYGEVSPAYVWSRICA
SGQKADVYLKELIWRDYAHTQICEFPAYGSRNARAEFGTLPWRDLREGRSDFIAWKTGRT
GYPIVDAGMRQLWTTGWMHNRVRMIAASFLIKHLLIDWRHGAQWFWETLVDADYANNSVN
WQWVAGSGVDANLFTRIMAPLTQSEKFDAAGYIRQWVPELAGLSDDVIHDPEARGARPDD
YPAKIIGHREGRERALSAYRHMKR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggatcaggccgcgttgctcgccgcggtgaaggaagggccggtcattccggtctat
gtgctggacgatgaaagtccccgcgactgggccattggcggggcgtcgcgctggtggctg
catcacagcctcgatgcgctggaccgaagcctgcgcgcgaagggatcgcggctcatcctc
cggcggggcagaagcgccgacgcgctggagaagctcgcgaaggaggtcgacgcgcgccgg
gttcatgcccttcgtcattacgagccatggtggcgcaacgcggaaaaggcggtggcgaaa
tcgctggacctctgcctgcacgacggagggctattgctgccgcccggcgcggtgcggacg
ggatcgggcgggatttatcgcatctacacgcccttctcgcgcgccgtgatggagcagatg
ccgcccgccgccccgagacccgcgccgcggttgatcggcgcgccatcggcgtggccgtcc
agcgagtcgctgaaggaatgggcgctccttccttcgaaacccgactgggcatcggcattc
gctgacgactggacgccgggcgaggagggcgcgcgccgcaatgtggcggatttcctcgac
gaagcgggtgactatgccgaggcgcgcaacctgccgtcgctcgaaggaacgtcgcggctg
tcgccccatcttcattatggggaggtgtcccccgcctatgtctggtcgcgtatctgcgcg
tcggggcagaaggcggacgtctacctcaaggaactgatctggcgcgattacgcgcatacc
cagatctgcgaatttcccgcttatggctcccgcaacgcccgcgccgagttcggcacattg
ccatggcgcgacctgcgcgaggggcgaagcgatttcatagcgtggaagacagggcggacc
ggctatcccatcgtcgatgcaggcatgcggcagctctggacgacaggctggatgcacaac
cgcgtgcgcatgatcgccgccagtttcctcatcaagcatctgctgatcgactggcggcac
ggcgcgcagtggttctgggagacgctggtcgatgcggactacgccaacaacagcgtcaac
tggcagtgggtggcgggcagcggggtggacgccaatctcttcacgcgcatcatggctccg
ctgacccagtcggagaagttcgacgccgccggctatatccggcaatgggtgcccgaactg
gctggcctgtccgacgacgtgattcatgaccccgaagcgcggggcgcgcggcccgatgac
tatcccgccaagatcatcggtcatcgggaaggccgtgagcgagcgctttccgcctaccgc
catatgaagcggtga
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