Sphingobium amiense: SAMIE_1029960
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Entry
SAMIE_1029960 CDS
T06684
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
sami
Sphingobium amiense
Pathway
sami01501
beta-Lactam resistance
sami01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMIE_1029960
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMIE_1029960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sami02000
]
SAMIE_1029960
01504 Antimicrobial resistance genes [BR:
sami01504
]
SAMIE_1029960
Transporters [BR:
sami02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SAMIE_1029960
Antimicrobial resistance genes [BR:
sami01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SAMIE_1029960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
GDH_ACT2
BIV_Env
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
BBD99495
UniProt:
A0A494WFA6
LinkDB
All DBs
Position
complement(3467342..3470494)
Genome browser
AA seq
1050 aa
AA seq
DB search
MLSRFFIERPIFAWVIAIGIMLAGLGSMLSLPIAQYPDIAPPGVGISATYPGASAETVET
AVTQIIEQQLTGLDGLMYFSSSSSANGRAQISVTFQKGTNPDTAQVQVQNRVQQALSRLP
NPVQQQGLTVTKQQTDFLMLVGLYDETDTASQADISDFLVNNMQDPIARIDGIGATQIFG
SQYAMRIWLNPYRLAAVKLMPSDVESAIRAQNVEVSAGQIGADPAPEGQQINATVTARSR
LQTPDQFRNIIVKTQSDGSIVHLSDVARVELGNESYSTNARLNGHPASGIALQLAPGADA
LKTAELVKAKVQELSGNLPHGYKVVFPRDTTPFIKLSVDEVIQTLIEAVALVVVVMFVFL
QSWRATLVPAIAVPVVLLGTFGILALFGYSINTLTLFGMVLSIGLLVDDAIVVVENVERL
MEQEGLSPRDATIKSMGEIGSALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSSML
LSVLVALILSPALCATLLRPIDHHKRDRGWAGKFNRWFDRLTGGYIRRTERVMTRRKLFW
GLYVVVLALLILIFTRLPTSFLPVEDQGQVMAQVTLPAGAKSSRTAAAVERVQNYFLNDE
KDNVAFAFIMTGFSFQGQGENVAQGFINLAPWEDRKGAANTAGAIAGRASKQLAAIRDAK
VLAMTPPAIRGLGQSNGFTFELLNSGGLSRARFLELRDRLIAAAQKDPALAGVRAATLED
TPQLRVDVDSEKLAVLGLTQADVDDVLSSAWGSTYINDFVDRGRVKRVYMQADAPYRALP
TDLDNWMVRSNSTGEMVPFSAFATTHWTMGPTTVARFNGLSSFELQGQAAEGASSGEAME
RMVALQKQLPAGTSYAWSGLSYQEQLSGGQAPLLYGLSVLVVFLCLAALYESWSIPLAVL
LVIPLGLIGAVIAVWARGLENNIFFQVGLLTTMGLAAKNAILIVEFAELAHYEGKNAWDA
ALEAARLRFRPILMTSLAFIAGCIPLAIASGAGAQSRIAIGTAVIGGMTTATVLAIFFVP
LFFLTIARLFGSDRPKDEPEAPLPQTGVPA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
gtgctcagccgctttttcatcgaacggccgatcttcgcctgggttatcgccatcggcatc
atgctggcgggcctcggctcgatgctctcgctgcccatcgcgcaatatcccgacatcgcg
ccgcccggagtaggcatcagcgcgacctatcccggcgcgtccgccgaaaccgtcgaaacc
gccgtcacccagatcatcgagcagcagctcaccggtctcgacggcctcatgtatttctcg
tcttcctcctcggcgaacgggcgcgcgcagatcagcgtcaccttccagaagggcaccaac
cccgacaccgcgcaggtgcaggtgcagaaccgcgtgcagcaggcgctgagccgcctgccc
aatccggtgcagcagcaggggctgaccgtcaccaagcagcagaccgacttcctgatgctg
gtcggcctgtatgacgaaaccgatacggcgagccaggcggacatttccgacttcctcgtc
aacaatatgcaggaccccatcgcccgcatcgacggcatcggcgcgacgcagattttcggg
tcgcaatatgcgatgcgcatctggctcaacccctacaggctggcggcggtcaagctgatg
ccatcggacgtcgaaagcgcgatccgggcgcagaatgtggaagtgtccgccgggcaaatc
ggcgccgatcccgcgcccgaagggcagcagatcaacgcgaccgtgacggcgcggtcgcgg
ctccagacgccggaccagttccgcaacatcatcgtcaagacgcagagcgacgggtcgatc
gtccacctgtccgatgtggcgcgcgtggaactgggcaatgaaagctattcgaccaacgcg
cggctgaacggccatcccgcctccggcatcgcgctccagctcgcgcccggcgccgacgcg
ctcaagaccgccgaactcgtgaaggccaaggtgcaggagctgtcgggcaaccttccgcac
ggctacaaggtggtcttcccgcgcgacaccacccccttcatcaagctgtcggtcgacgaa
gtgatccagacgctgatcgaggcggtcgcgctcgtcgtcgtggtgatgttcgtcttcctg
caaagctggcgcgccacgctcgtgccggccatcgccgtgccggtggtgctgctgggcacc
ttcggcatcctcgcgctcttcggctattcgatcaacacgctgacgctgttcggcatggtg
ctctccatcggcctgctcgtcgatgacgccatcgtcgtcgtggaaaatgtcgagcgcctc
atggagcaggagggactgtccccgcgcgatgcaacgatcaagtcgatgggggagatcggg
agcgcgctcgtcggcatcgcgctggtcctgtccgccgtgctgctgcccatggcctttttc
ggcgggtccaccggcgtcatctatcgccagttctccatcactatcgtatcttccatgctg
ctgtccgtgctggtggcgctgatcctttcgcccgccctgtgcgcgacgctgctgaggccc
atcgaccatcacaagcgtgacaggggctgggcaggcaaattcaaccgctggttcgaccgc
ctgactggcggctatatccgccgcaccgaacgggtgatgacccgccgcaagctgttctgg
ggtctctacgtcgtcgtgcttgccctcctgatcctgatcttcacccgcctgcccaccagc
ttcctgccggtcgaggatcaggggcaggtgatggcgcaggtgacgctccccgcgggcgcc
aagtccagccgcactgccgcggcggtcgagcgcgtgcagaattatttcctgaacgatgaa
aaggacaatgtcgccttcgccttcatcatgaccggcttcagctttcaggggcagggcgag
aatgtggcgcagggcttcatcaaccttgcgccatgggaagaccgaaagggcgcagcgaac
accgccggagccatcgccggacgcgccagcaagcaactggccgcgatccgcgacgcgaag
gtgctggccatgacgccgcccgccattcgcggccttggccagtcgaacggcttcaccttt
gaactgctgaacagcggcggcctcagccgcgcgcgtttcctcgaactgcgcgaccggttg
atcgcggcggcgcagaaagaccccgcgctcgcgggcgtgcgcgcggcgacgctggaggat
acgccgcaattgcgcgtcgacgtcgactccgaaaagctcgccgtgctggggctgacgcag
gccgatgtcgacgacgtgctaagttccgcctggggcagcacctatatcaacgatttcgtc
gaccggggccgggtgaaacgcgtctacatgcaggccgacgcgccttaccgcgcgcttccg
accgatctcgacaactggatggtgcggtcgaacagcaccggggaaatggtgcccttttcc
gcctttgcgacgacgcactggaccatggggccgaccacggtcgcgcgcttcaacggcctg
tcgtccttcgaacttcaggggcaggcggcagaaggtgcaagctcgggtgaagcgatggag
cggatggtcgcattgcagaagcagttgcccgccggcaccagctatgcttggagcggcctt
tcctatcaggaacagctttcgggcggacaggcgccgctgctctacggcctgtcggtgctg
gtcgttttcctgtgcctcgccgcactctatgaaagctggtcgatcccgctcgccgtactg
cttgtcataccgctcggcctgatcggcgctgtcatcgcggtgtgggcgagggggctggaa
aacaacatcttctttcaggtcggcctgctgaccaccatgggccttgccgcgaagaacgcc
atcctgatcgtggaatttgccgaacttgcgcattatgaaggcaaaaatgcgtgggacgcg
gcgctggaagcagcccggctgcgcttccggccgatcctgatgacatcgctggcgttcatc
gcgggctgtatcccgctcgccatcgcatcgggcgcgggggcgcagagccgcatcgccatc
ggcacggcggtgatcggcgggatgacgaccgcgaccgtcctcgccatcttcttcgtgccg
ctcttcttcctgacgattgcgcgcctgttcggcagcgacaggccgaaggacgaaccggaa
gcgcccctgccgcagacgggagtgcctgcatga
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