Sinocyclocheilus anshuiensis: 107654268
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Entry
107654268 CDS
T04917
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107654268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sanh03400
]
107654268
Enzymes [BR:
sanh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107654268
DNA repair and recombination proteins [BR:
sanh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107654268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
RTT107_BRCT_5
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
107654268
NCBI-ProteinID:
XP_016296776
UniProt:
A0A671KIH1
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MMEGASKSDATPQTAVAAQVPFIDLCTVLENIQKTKLRPDKGKILKDFIDSWRNFHAALH
KDNSNTTDSFYAAMRLIVPQFERERMAYGIKENMLAKLYIEVLGLPKNGPDANKLLNYRT
PTTSQGEAGDFALMAYFVLKKRCTSQGNLSIKEVNDFLDSVAINNASKQKDQVKKSLLHL
ITQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAPELYNVTTDLNKVSRQLHDPSVS
LSEVSIDLFSAFKPMLAAVANIRQIEKQMGNRTFYIETKFDGERIQLHKAGDVYKYYTRN
SYEYTQQFGASPLEGSLTPYIHNVFKPHVVNCILDGEMMAYNPTTETFMQKGSKFDIKRL
MDDSDLQTCFCVFDVLLVNNQKFANEPLKKRYEILETVFTPIKGRIQLVTKSEGKTMQEV
VNSLNEAIDNLDEGIMVKDPMSIYKPDKRGEGWVKIKPEYVDGLMDELDLLIVGGYWGKG
RRSGMLSHFLCAVAEVPSPGEKPTVFHTLCRIGSGYTMKELYDLGLKLAKHWKVYNRNNP
PAAILCGTEKPEVYIEPRNSVIIQVKAAEIVSSEMYKTNCTLRFPRIERIREDKEWYECM
TLAELSQFRSRASGKLASRHLHIQEDQPEKKKHKFVAKPKKTIGVIDHFKSQDLSAVTKE
MDMFEDVEFCVINGNDEYSKAELEKVVARCGGIVVQNPGKDTYCVIAAAHNMRVKNLISS
DQHDVVWATWLLECLENKQVIPWQPRHMIHMSPSTRNHFAKEYDRYGDSYYVDTDEQQLR
EVFERIGPTEAECSSVAQIEAENAWDDLPTSIFRPCTAYFDRCADLGDPKTIIRGTSLDT
CALEFRFHGGTVVEKLKEGISHVIVESERRTLGLKTLRRLYAKKFKIVRESWVTDSIKAG
HVEDETDYLI
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggtgcctcaaaaagtgatgccacaccacagacggctgttgctgcacaagtt
ccgttcatcgacctctgcacagttctggagaacatccaaaagaccaaactccgaccagac
aaaggcaaaattctaaaggattttattgattcttggaggaacttccatgcagcgcttcac
aaggacaattccaataccacagattcattttacgcagccatgcgtcttattgtgcctcaa
tttgaacgagagcgaatggcttatggtataaaagaaaacatgcttgccaaactatatatt
gaagttttaggcctgcctaaaaatggacctgacgcaaacaaactcctaaattatagaact
ccaaccacaagtcaaggagaagcaggtgactttgcccttatggcctacttcgtcctgaaa
aaaaggtgtacaagtcaggggaatttaagcattaaagaagtcaatgacttcttggattcc
gtagctatcaacaatgccagcaaacagaaggatcaagtgaagaaaagccttttgcatctg
ataacccagagttcagctttggaacagaagtggctcattagaatgatcctcaaggacatg
aaacttggcattagcaaggagacagtacttcaggttttccatccagatgcaccagaactc
tacaatgtcaccacagatctgaataaagtcagccgacaacttcatgatccatctgtgtcc
ctcagtgaggtctccatcgatctgttttctgcttttaaaccaatgctggctgctgttgcc
aacatcagacagatagagaagcaaatgggcaaccggacattctatattgagactaagttt
gatggtgaacgcattcagctgcacaaagctggagatgtttacaaatactataccaggaac
tcttatgagtacacacaacagtttggggcctctccactagagggctccctcactccatac
attcacaacgtcttcaaacctcatgtggtaaactgcatattggatggagagatgatggct
tataaccccacaactgagaccttcatgcagaagggcagtaagtttgatattaaaaggctg
atggatgactctgatttgcaaacctgcttttgtgtatttgatgtcttgttagtaaacaat
cagaagtttgcaaatgagcctctcaagaagcgctacgaaattcttgagactgtcttcaca
ccgatcaaaggtcgtatccagttggtcacaaaatctgaaggcaaaaccatgcaagaagtg
gtgaattctctcaatgaggccattgacaatctggacgaggggattatggttaaggatccc
atgtccatctacaaaccagataaacggggcgaaggatgggtgaaaattaagcctgaatat
gtagatggtctgatggatgaacttgatctgctgatagtgggaggctactggggtaaaggc
aggagaagcgggatgctctctcattttctgtgtgcggtagcagaggtgccgagtccaggg
gagaagcccacagtgttccacaccctctgccgcattggatcaggctacactatgaaagaa
ctgtacgatcttggtctgaagttggccaaacattggaaagtttacaacagaaataatcct
ccagctgccatcttgtgtggaacagaaaaaccagaggtttacatagaaccacgcaactca
gtgatcatacaagtcaaagcggcagagatcgtctctagtgaaatgtataagaccaactgc
acattacgcttccccagaatagaaagaatcagagaagacaaagagtggtatgagtgcatg
accttggctgaactgagccagttccgctccagagcttctggaaagctggcttccagacat
ctacatatccaagaggaccagcctgaaaagaagaagcacaagttcgtagccaagcccaag
aagacaatcggagtcattgaccactttaaatctcaggatttatcagcggtcaccaaagag
atggatatgtttgaagatgtggagttttgtgtgataaatggcaatgatgaatattccaag
gcagagcttgagaaagttgtggcccgttgtggaggcattgttgtgcagaaccctgggaaa
gacacgtactgtgtgattgcagctgcgcacaacatgagagtaaagaacctcatctcctca
gaccaacatgatgtggtgtgggctacttggctgctggagtgtctggaaaataagcaggtt
ataccctggcaaccacgtcacatgatccacatgtcaccttccaccaggaaccacttcgct
aaagagtatgatcggtatggagacagttattatgttgacactgatgaacaacagctgagg
gaagtctttgaaaggataggccccacagaagctgagtgttcgtctgtggcacagatagaa
gcagagaatgcctgggatgacttgcccactagcatttttaggccttgcactgcttacttt
gaccggtgtgctgaccttggagatcccaaaaccatcatacggggtacaagtttggacacg
tgtgccttagaattccgattccatggtggtactgttgtggagaaactgaaggaaggaatc
tcgcatgtcatagtagaaagtgaaagaagaactctgggcttgaagacgttgaggcgactt
tatgctaagaagttcaaaattgttcgagaatcttgggtgaccgattctatcaaagcaggc
catgtagaggatgagactgactacttaatataa
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