Sinocyclocheilus anshuiensis: 107655607
Help
Entry
107655607 CDS
T04917
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107655607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sanh03000
]
107655607
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107655607
04121 Ubiquitin system [BR:
sanh04121
]
107655607
Enzymes [BR:
sanh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107655607
Transcription factors [BR:
sanh03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107655607
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107655607
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107655607
Ubiquitin system [BR:
sanh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107655607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-C3HC4_2
zf-UDP
Torus
zf-RING_2
Nup35_RRM_2
DZR_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
107655607
NCBI-ProteinID:
XP_016298653
UniProt:
A0A671R2L2
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRSPEVKEDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKITENRKHLSSVRVVQRNLVFVVGLSQRL
ADPEVLKRLEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSMQCPKSDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKTNPNFLQSSTGEKTKGKSGTSQSSNSNNKESWPSLQTTGKTPNGLPEHHKTPPL
DGGSDSENMTPDGPYTELGLGSITGLPPFTSNWNSGSPNNKHSDSIGISNGETSQQISGN
DSPSPPPGLSKPSLVVPICIAGLTVRSPFEGAAAESQSLFSDNSNFRHPNPIPSGLSGFS
SSLHSNSDWPTAPEPQSLFTSDTIPVSSSTDWQAAFGFGSSAKQQDDDLGFDPFDVTRKA
LADLIEKELSVQDKASLPMTGRKSVPVFPHGPLLSPLHNAPSMKGPLQPPTSSHFAPNSS
LPSRGFSQLPHRTVYNSFSFPGQTQTSRHSWMGMPMRNNLPHLNHTGAAQHSSFLDLNLA
PQQQHHHNTGFGGIHMTENSTSVESLNVKEWQDGLRALLPNININFGGLPSSSSSSSSSS
SSSSVNHTGGISHSLSWDGTASWMDPAIITGIPASSGNSLDSLQDDNPPHWLNSLQALTE
MDVPTGSTVPPQPRHSGPFGAQFPHRAGWTPYPTTATANPATQFHSPPPGFQTAFRASAQ
ASTDLLQSAGMDRH
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagccctgaggtgaaggaggaccccatggagtgcccactgtgcatggaacca
ttggaaattgacgacgtcaatttcttcccttgcacctgcggctatcagatctgccgcttc
tgctggcatcgcatacgcacagatgagaacggcctctgcccggcctgcagaaagccctat
ccagaagaccctgcagtctacaaacctctgtctcaagaggaacttcagaggataaagaat
gagaagaagcagaagcagaatgagcggaagcagaagatcacagagaaccgcaagcacctc
tccagtgtgcgagtcgtccagagaaacctggtgtttgtggtgggcctttcacaaagactt
gccgatcccgaggtcttaaaaaggctggagtacttcgggaagtttgggaagatccataag
gtggtcatcaataacagcacttcttatgctggctcacagggtcctagcgccagtgcctac
gtcacttacattcgatcagaagatgccctcagagctatacagtgtgttaacaatgttgta
gtagatggcagaacacttaaggcttctttaggtacaacaaaatactgtagttattttcta
aaaagcatgcagtgccccaaatcagactgtatgtatcttcacgagctgggagacgaagct
gctagtttcacaaaagaagaaatgcaggcagggaaacatcaggaatatgaacagaaactc
ttacaggagctctacaaaacaaaccccaacttcctgcagagctcgacaggggagaagaca
aagggcaaatcgggcacgtcacagagttccaacagtaacaacaaagaatcttggccttcg
ttacaaaccacaggaaagacacccaatgggcttccagaacaccataagaccccaccccta
gatggcggctctgactctgaaaacatgactccagacggtccgtacacagagctcggcctt
ggctccatcactggcctgcctcccttcacatcaaactggaactctggcagcccaaataac
aaacattcagattccatcggtataagtaacggagaaacatcacaacaaatttccggcaat
gactctccatcgccgcctcctggcctgtccaagccatctctagtggtgcctatctgtata
gcagggctgacggtacggtcaccttttgaaggagcagcagccgagtcacaatcactcttt
tcagacaacagcaacttccgacaccccaatcccatccccagcggcctgtctggcttttcc
agttcccttcacagcaactccgattggcccactgccccagaaccacagagcctcttcacg
tcagataccataccagtgtcgtcctctacggactggcaagcggccttcggtttcggttct
tcggccaagcaacaggatgatgacctcggctttgacccatttgacgtcacccgtaaggca
ctggctgaccttatagagaaagagctctcggtgcaagacaaagcctccttacccatgact
ggcagaaaatcagtgccagtcttcccccacgggcctttactcagcccactccacaacgcc
ccttccatgaaaggcccacttcagccccccacgtcctcacacttcgccccaaactccagc
ttgccctcacggggcttctcccagctcccacaccgcactgtctacaactccttcagcttt
cccgggcagacacagacctctcgccacagttggatgggcatgcccatgcgcaataacctc
ccacacttgaatcacactggagctgcacagcacagcagctttttggacttgaacttggca
ccacaacagcaacatcatcacaatacggggttcggaggtattcatatgacagaaaacagc
acctcagtagaaagtctaaacgtgaaggagtggcaagatgggctcagagcgcttttaccc
aacatcaacatcaactttggtggactgcctagctcctcctcgtcttcgtcttcatcctcc
tcctcatccagtgtgaaccacacaggcggcatctcacacagccttagctgggacggcaca
gccagctggatggaccctgccatcatcacaggtatcccagcatcctcaggcaacagtctg
gactctctgcaggatgacaatcctccccactggctcaattccttgcaggcgctcacagag
atggatgtccctactggctccacagtgccccctcagccccgacacagtggacccttcgga
gcccagttcccccacagagccggctggaccccttatccaaccacagccacggccaacccc
gccacccagttccactcacctcccccaggcttccagaccgccttcagagcctcagcccag
gcctccacagatctgctacagagtgccggcatggaccgccattag
DBGET
integrated database retrieval system
