Sinocyclocheilus anshuiensis: 107657698
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Entry
107657698 CDS
T04917
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107657698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107657698
03036 Chromosome and associated proteins [BR:
sanh03036
]
107657698
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107657698
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107657698
mRNA degradation factors
5'-3' decay
Decapping complex
107657698
Chromosome and associated proteins [BR:
sanh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107657698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Motif
Other DBs
NCBI-GeneID:
107657698
NCBI-ProteinID:
XP_016301389
UniProt:
A0A671M7U8
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MATARTEIPSSVMPMSKQNGQSKPLTLQSGSLTSSTQSGKTPVMPQKGSSIRQSSGGIRF
GDDWKKCLQLPPKDLRVKTTDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIP
IVLSGRDILARAKNGTGKSGAYLIPLLERIDLKKDYVQAIVFVPTRELALQVSQISINMS
KHLGGVKIMATTGGTNLRDDIMRLDETVHVIIATPGRILDLIKKGVAKVDKAQMIVMDEA
DKLLSQDFVVLIEDIISFMPKKRQILLYSATFPSSVQKFMSKHLQKPYEINLMDELTLKG
ITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKM
MQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRY
GHLGLAINLITSEDRFNLKGTEDQLMTDIKPIPSSIDKNLYVAEFHTMNPDEEEAAHKAG
ELN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcgagaacagagatcccttcttcagtcatgccaatgagcaaacagaatgga
cagtccaagcccttgaccctccagtcaggatcgcttacttcctcaacacagtcaggaaaa
acacctgtgatgccccagaaaggaagcagtatacgccaaagcagtggcggtatcaggttt
ggtgatgactggaagaaatgcctgcagcttccaccgaaagacttgcgagtgaaaaccaca
gatgtgactgcaaccaaaggaaacgagtttgaagattactgccttaagagggaactgctg
atgggcatcttcgaaatgggctgggagaagccttcccctatccaggaagagagtattcct
attgtcttgtcagggagggacattcttgcccgagctaaaaatggcacaggtaaaagcgga
gcctacctcatccccctcttggaaaggattgacctgaagaaggactatgttcaagccata
gtgtttgtacctactcgtgagttggctcttcaggtgagccaaataagtatcaacatgagc
aagcaccttggtggcgtcaagattatggctacaacaggtggcactaacctgagggatgac
atcatgcgtcttgatgagactgtacatgttataatagctaccccaggaaggatcctggac
ttgataaagaaaggtgtggccaaggttgacaaagctcagatgattgtgatggatgaggct
gataagttgctttctcaagactttgtggtgctcattgaggacatcatcagcttcatgccc
aaaaaacgccagattctgctctattctgccactttccccagcagtgtgcagaagtttatg
tccaaacaccttcagaagccatatgaaatcaatctgatggatgagctgacactgaaaggc
atcactcagtactatgcttatgttacagaaagacagaaagtgcactgtctcaacacactg
ttctccagacttcaaatcaaccagtcaatcatcttctgtaactccacccaaagggtggaa
ctccttgccaagaagatcacacaactaggctattcctgcttttacatccatgccaagatg
atgcaggaatacagaaatcgtgtgttccatgacttcagaaacggactgtgtaggaacctg
gtctgcacagatcttttcacaagaggaattgacatccaggctgtcaatgtagtcatcaac
tttgacttccccagaaatgcagagacatatctacaccgcattggtcgatcaggtaggtac
ggtcacctgggattggccattaacctgatcacctcagaagatcgtttcaacctaaagggc
actgaggaccagctgatgactgacataaagcccatacccagcagcattgacaagaacctg
tatgtggcagagtttcacaccatgaaccctgatgaagaggaggctgctcacaaagcaggc
gagcttaattaa
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