Sinocyclocheilus anshuiensis: 107668438
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Entry
107668438 CDS
T04917
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107668438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sanh03041
]
107668438
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107668438
Spliceosome [BR:
sanh03041
]
Complex A
U2 snRNP components
U2 related factors
107668438
Complex B
107668438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPX
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
107668438
NCBI-ProteinID:
XP_016315790
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MNPVKVYELQLCCVCRHYRKRSGSRSKSRSPDSKRSKKEEQTGSRARERSRRERSRSREH
RRSRSRDRKRPRRSRSRERRRRSRGRSKEKSENTEPCTDKKKMKEEKEKEKEEEKPEDQD
FDQNTLEEEMRKRKERVEKWREEQRKKAMENIGELKKELEEMKQGKKWSLEDDDGQRAHR
SCRKNNTCDIFRQKIELLCVLDPLDAYMEEVKEEVKKFNMGTMKGGNDKKGSVSVTKVVT
VVKTKKMVHTTKKKGELMENDQDAMEVQLHQHTRVSVSFRTIAFLLPMFRHILDQRPLGE
AEGPIAVIMTPTRELALQITKECKKFSKSLGLRVVCVYGGTGISEQIAELKRGAEIIVCT
PGRMIDMLGANNGRVTNLRRATYVVMDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSAT
FPRTMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIAEEKKFLKLLEILGHYQEKGSV
IIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARG
LDVKQLILVINYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEEQARYAGDIIKALELSG
SAVPPELELLWTNFKEQQKAEGKSIKSSSGFSGKGFKFDETEHVLANERKKLQKAALGLH
DSDDEDAALDIDEQIESMFNSKKRVKDLSAPGGAVGASAVSVSGSLTSMSGLSGPSAPSA
GNIQKLEIAKKLALKIQAQKNLGAEAQDVMQQATNAILRGGTMIAPSVSAKTIAEQQAEK
INAKLNYTPVEKLEEERQATEATDTVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSE
AAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQPT
SKSRYKVL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgttaaagtgtatgagctccagttgtgttgtgtttgcaggcattacaggaag
cgctccggctccaggtctaagagccgctcgccggactccaagcgctcgaagaaggaggag
cagacgggatcccgcgcccgcgagcgcagccggagagagaggtcacgcagccgagagcac
cgcaggtcacgctccagagaccgcaagaggccgaggcgctccaggagccgcgagcggagg
cgcaggagccgagggaggagcaaggagaagtctgagaacacagagccctgcactgacaag
aagaagatgaaggaggagaaggagaaggagaaggaggaggagaagcctgaagatcaggac
tttgaccagaacactctggaggaggagatgaggaagaggaaggagcgagtggagaagtgg
agggaggagcagaggaagaaagccatggagaacatcggagaactcaagaaggagctggag
gagatgaagcaggggaagaagtggagtctggaggacgacgacggtcagagagcacaccgc
tcgtgtagaaaaaataacacatgtgacatcttcagacaaaaaattgaattgttgtgtgtc
ctggacccgctggacgcttacatggaggaggtcaaagaggaggtcaagaagttcaatatg
ggcaccatgaaaggaggcaacgacaagaaaggcagtgtgtctgtgaccaaagtggtgacc
gttgtgaagacgaagaagatggtgcacaccaccaagaagaaaggagagctgatggagaac
gaccaggacgccatggaggtacagcttcatcagcacacacgtgtttctgtgtcatttaga
accatcgccttcctgctgcccatgtttcgccacatcttagaccagcggccgctgggagag
gcagaaggacccatcgccgtgatcatgacgccgacgcgagagctggcgctgcagatcacc
aaagagtgcaagaagttctccaagtctctgggtctgcgtgtggtgtgtgtgtacggcggc
accggcatcagcgagcagatcgcagagctgaagcgcggcgcagagatcatcgtgtgcact
ccgggacgcatgatcgacatgctcggtgccaataacggtcgcgtgaccaatctgcgcaga
gccacgtatgtggtgatggacgaggccgaccggatgttcgacatgggctttgaaccacag
gtgatgcgtatcgtggataacgtgcggcccgaccgacagacggtgatgttctcggccacg
ttcccgcgcacgatggaggctctggcgcgcaggatcctgtccaaacccatcgaggtgcag
gtgggaggcaggagcgtggtgtgctcagacgtggagcagcacgtgattgtgatcgcggag
gagaagaagttcctgaagctgctggagattctgggtcactatcaggagaagggctccgtc
atcatcttcgtggacaagcaggagcacgccgacggcctcctcaaagacctgatgaaggcc
tcgtacccctgcatgtctcttcacggaggcatcgatcagtacgacagggacagcatcatc
aacgacttcaagaacggtgcgtgtcgtctgctggtggccacctctgtggcggcgcgaggc
ctggatgtcaagcagctgatcctggtgatcaactacagctgtcccaaccactacgaggac
tatgtgcaccgcgccggacgcaccggccgagccgggaacaagggttacgcgtacaccttc
atcactgaagaacaggctcgttacgccggagacatcatcaaagcgctggagctgtctgga
tcggccgtcccgccggagctcgagctgctctggaccaacttcaaggagcagcagaaagct
gaggggaagagcatcaagagcagcagtggattctccgggaagggctttaagtttgacgag
acggagcacgtgctggctaacgagcggaagaagctgcagaaggctgcgttaggtctgcac
gactctgacgacgaggatgcggctctggacatcgacgagcagatcgagagcatgtttaac
tctaagaagcgtgtgaaggatctctctgctccgggcggcgctgtgggagcgtctgcggtc
agtgtgagcggatccctgacctctatgtccggtctgagcggcccgagcgctccgtccgcc
gggaacatccagaaactggagatcgccaagaaactggctctcaagatccaggcgcagaag
aacctcggcgcggaggcacaggatgtgatgcagcaggccacaaacgctatcctgcgcggc
gggacgatgatcgcgccctccgtctcggctaagaccatcgcggagcagcaggcggagaag
atcaacgctaaactgaactacactccggtggagaagctggaggaggagcggcaggccacc
gaggccacggacaccgtcaagagatacgaggaggagctggagatcaacgacttccctcag
acggcgaggtggaaggtgacgtctaaggaggctcttcagcgcatcggcgagtattcagag
gcagccatcactatccgaggaacatatttcccaccgggcaaagagcccaaagagggagag
cgcaagatctacctggccatcgagagtgcgaatgaactggccgtgcagaaggccaaagca
gaaatcacacggctgatcaaagaagagctgatccgtctgcaaaactcctaccagcccacc
agcaagagccgatacaaggttctgtag
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