Sinocyclocheilus anshuiensis: 107673688
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Entry
107673688 CDS
T04917
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03013
Nucleocytoplasmic transport
sanh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107673688
03015 mRNA surveillance pathway
107673688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107673688
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107673688
mRNA cycle factors
P-body specific factors
107673688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
107673688
NCBI-ProteinID:
XP_016322884
UniProt:
A0A671SYP8
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MRSEKEQRTGSRERGSVEIQFRECQREQDNAAVNPRHKEEKKEIFTKVVIRRLPPSLSKD
QLEEHLSPLPSFDYFEFFPADQSLYPHLFSRAYINFKNPEDIIIFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKVSKKKLKKKDAKAGTIEEDPEYRRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKLEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSEKEIKIKLLKKCDRDDDVDSDRLKDKGDSGETEKNRWEKPAGHTKSK
DSKDNRSQIESDKEQREGHGRRQRDKEHRGRDEERKRQRHHYEFDKFMRRKEETKWGKGY
CQDRAKKDQHHGYSYCPETGDKLGKEDREDMGSRKERIRNKSVLVHQEKRTSQSEGPDQI
GGALPAKDRPAMQLYQPGARNRKRMGSGNKTFDFPPISPEHGGEHCYKTVIGTGSEKSAD
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggagcagaggacgggaagcagggagagaggcagcgtggagatccag
ttcagggagtgtcagagggagcaggacaacgccgcggtgaacccgaggcacaaggaggag
aaaaaggagatcttcaccaaggttgtcatacgccgactgccacccagtctatcaaaagac
cagctcgaggagcatctgagtcctcttccatcttttgactatttcgagttcttccccgct
gatcagagcttatacccacatctcttctcaagagcatacatcaacttcaaaaacccagag
gatatcattattttcagagatcgctttgatggctatgtattcattgacaataaaggccaa
gagtatccagctgttgtagaatttgctccatttcagaaggtttccaagaaaaagttaaag
aagaaagatgccaaagcaggaactattgaagaagacccagaatacaggcgatttctggaa
aattactcttgtgatgaggagaaatcaatggcaaatccagaaacactcctgggagagatt
gaagctaaaacccgagaactcatagccaaaaggacaacacctttgctggaatacatcaaa
aacaagaaattagagaaacagagaataagagaggaaaaaagagaggagaggcgaaggagg
gaactggaaaagaagcgacagagggaggaggagaagcggaagcgcagagaagaggagaga
cgaaagcgaaaggaggctgaaaagcaaaagaagctctctgaaaaggagataaagatcaag
cttttgaagaaatgtgatcgagatgatgacgtggactcagacagactgaaagataaagga
gacagcggagaaacagagaagaacagatgggaaaagccagcaggacacactaagtcgaag
gattccaaggataataggagtcaaatcgagagtgacaaggagcagcgggaaggtcacggc
cgtcgccagagggacaaagagcatcgcggcagagatgaggagcgcaaacgacagaggcat
cactacgagtttgacaaattcatgcgacgcaaggaggagaccaaatggggtaaaggctac
tgccaggacagagccaagaaagaccaacatcatggctattcttactgcccagagaccgga
gacaaactgggcaaggaggatcgagaggacatgggcagcaggaaagaacggattcgcaat
aagtctgtgttagtgcatcaggagaaaaggacttcccagtctgaggggccagaccagata
ggaggggctctgccagcaaaggaccgaccggcaatgcagctgtaccaacctggtgctaga
aaccgcaagcgaatgggctctgggaacaagacatttgacttcccaccaatctctcctgaa
cacggaggagaacactgctacaagacggtcattggaacaggctcagagaagagtgccgat
gagtga
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