Sinocyclocheilus anshuiensis: 107693978
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Entry
107693978 CDS
T04917
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04140
Autophagy - animal
sanh04148
Efferocytosis
sanh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107693978
04148 Efferocytosis
107693978
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107693978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sanh04131
]
107693978
Membrane trafficking [BR:
sanh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107693978
Hops complex
107693978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
VPS11_C
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
Glyco_transf_10
DUF6543
Kbp-5
Motif
Other DBs
NCBI-GeneID:
107693978
NCBI-ProteinID:
XP_016349079
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKYPSENGKNFQLPVGISACDSGRGHIVLGDMDGQIWFLTRSL
QPSSFQAYKLRVTHLYQLKQHNILVSVGQDEPGINPLVKVWNLDKKDSGSPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLSLHEGNCPITGLAFR
QAGKVTHLFVATLEKVQCYTLSVKEYPRIKLDTHGCALRCSALTDPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGHKLLTHWHRGYLLLLTHNNKSPSKSDYGSRQTSPTEKHILTIYD
LDNKFIAYSAAFDDVIDVLAEWGSFYVLTRDKTLYMLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDNDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSNESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHMHHEWYLKIQLEDLKNYQEALRYIGRLPFDQAESNMKRYGKILMHHV
PESTTILLKRLCTGYHPSKDTTDRDSLDRPAENKANPEEFIPVFANNPRELRAFLEHMIE
VDPFSPEGVYDTLLELRLQDWAHEQDPGKKKVLQEAALSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDSEVCLWEQALGYFARKEENCK
AYISEVLQHIDENNLMPPLLVVQTLAHNSTASLSVIKDYLINKLERETQQIEEDERKIRQ
YREETAHLRAEIQELKTCAKIFQKTKCSMCNSPLDLPSVHFLCGHSFHQHCLESFADSEA
ECPTCTPENRKVMDTLRVQDQKRDLHDHFHRQLKCSNDGFSVIADYFGRGVFNKLTLITD
PPGGKSGAGNLEAEFNRDLLINTKRNV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagacgttttgtgtttttcgataaagaaacggtgaaatat
ccgagcgaaaatgggaaaaatttccaactaccggtgggaatatcggcctgtgattcaggt
cgaggacacattgtgcttggagatatggacgggcagatctggtttttgacccgctccctg
cagccgtccagctttcaggcttataagctgcgcgtgacacacctgtaccagctgaaacaa
cacaacatcctggtgtctgtgggtcaggatgagcctggcatcaatcctctggtgaaggtg
tggaaccttgataagaaggacagcggcagtcctctgtgtacccggatattccctgccata
cctggaaacaaacctactgaagtgtcttgtctcagtgtacatgaaaaccttaatttcatg
gctataggttttacagatggcagtgttgtgctgacgaagggtgacatcaccagagacaga
cacagtaaaactctcagcctccacgagggcaactgtccaatcacaggcctggctttccgg
caggctggcaaagtcacacacctgtttgtcgccactttagaaaaagtgcagtgttacaca
ttatcagtgaaagagtaccctcgtataaaactggacacacacggctgtgccctccgctgc
tcggcgctcacagacccctcgcaggactcacagttcatagtggctggagatgactgtgtg
tatttgtaccagcccgatgagagaggaccctgttttgctttcgatgggcacaaacttcta
actcactggcacagaggatacctgctgctactcacacacaataacaagtcacccagcaaa
tctgattatggcagcagacagacatcccctacagaaaagcacatcctgaccatttatgac
cttgacaacaagttcatcgcttacagtgcggcgtttgatgatgtcattgacgttctggca
gaatggggctctttttatgtcctaacgagggacaaaacactgtatatgctgcaagaaaaa
gacacgcagaccaagctagagatgctgtttaagaagaacctgtttgtgatggccattaac
ttggctaaaagtcaacatctggacaatgatggtctgtctgagatattcagacagtatgga
gaccatctctacgtcaaaggggatcatgatggagctattcagcagtatattcgcaccatt
gggaagctcgagccctcatacgtaatccgtaaatttttggatgcacaaaggatacacaac
ttgacagcgtacctacaggccctccacaggcaatcgctggccaacgctgaccacactact
ctactgctcaactgttacaccaaactgaaggacagctccaagctggaagagttcataaag
agcaatgaaagtgaggtgcatttcgatgttgaaattgccatcaaggtgttacgtcaggcc
ggttatcacagtcacgccgtgtttctggcagagagacacatgcaccatgaatggtatcta
aagatccagctagaggatttgaagaattatcaggaggctttacgctacattggaaggttg
ccatttgatcaggcagagagcaatatgaagcgctacgggaaaattttaatgcaccatgtg
cctgaaagcaccaccatcctcttaaaacgcctttgcaccggctatcaccccagcaaagac
acaaccgacagggacagcctggacaggcctgcggaaaacaaggccaatccagaagagttc
atcccagtctttgccaataacccacgagagctgcgagcgttcctggaacacatgatcgag
gtggatccgttctcacctgagggagtttatgacactctcctagagctcagactacaggac
tgggcacatgagcaggacccagggaagaagaaagtcctgcaggaggcagcactgtccctg
ctgaggagtgacaacactgtgtttgacaaagccctggtgctctgccagatgcacaacttc
aaggaaggagtgctgtatctgtatgaaaagggcaaactgtaccagcagatcatgcattac
cacatgcagaatgaggagtacgggaaagtcgtggaggcctgtaaacgttatggggacagt
gaggtgtgtttgtgggaacaggctctgggctattttgcacgcaaagaagaaaactgcaag
gcctacattagtgaagtcctgcagcacattgatgaaaataacttgatgcctccacttctg
gtggtgcagactttggctcataactccacagcatcactgtcagtcataaaagactacctg
ataaataaactggagcgggagacccagcagattgaggaagatgaaaggaagattcgacag
tatagagaggaaacggcccatcttcgtgctgaaatacaggaacttaaaacctgtgcaaag
atcttccagaagaccaagtgcagcatgtgcaacagcccactagatctgccatctgtgcac
ttcctgtgcggccactctttccatcagcactgcctagagagctttgcagacagcgaggcc
gagtgccccacctgcacccctgagaacaggaaagtgatggacacgttgcgtgtgcaagat
cagaaacgagatctgcatgatcatttccacagacagctcaaatgctctaatgacggcttc
tcagtcatcgctgactattttggccgtggagtgtttaacaaactcactctgataacggat
cctcctggaggaaagagtggagctgggaatctggaggctgaattcaacagagatctgctc
attaacaccaagaggaatgtttga
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