Sinocyclocheilus anshuiensis: 107695475
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Entry
107695475 CDS
T04917
Name
(RefSeq) regulator of nonsense transcripts 3A-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03013
Nucleocytoplasmic transport
sanh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107695475
03015 mRNA surveillance pathway
107695475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107695475
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107695475
mRNA cycle factors
P-body specific factors
107695475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
107695475
NCBI-ProteinID:
XP_016350882
UniProt:
A0A671NY12
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MRSEKEQRTGSRERGSVEIQFRECQRKQDNVAVNPKHKEEKKETFSKVVIRRLPPSLSKD
QLEEHLSPLPSFDYFEFFPADQSLYPHLFSRAYINFKNPEDIIIFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKVSKKNLKKKDAKAGTIEEDPEYRRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKLEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSEKEIKIKLLKKCDRDDDMDSDRLKDKADSGEIEKNRWEKPAGHTKSK
DSKDNRSQIESDKEQREGHGRRQRDKEHRGRDEERKRQRHHYEFDKFMRRKEETKWGKGY
CQDRAKKDQHHGYSYCSETGDKLGKEEREDKGSRKERIRNKSVLVHQEKRTSQSEGPDQI
GGALPAKDRPAMQLYQPGARNRKQMGSGNKTFDFPPISPKHGGEHCYKTVIGTGSEKSAN
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggagcagaggacaggaagcagggagagaggcagcgtcgaaatccag
ttcagggagtgtcagaggaagcaggacaacgtcgcggtgaacccgaagcacaaggaggag
aaaaaggagaccttcagcaaggttgtcatacgccgactgccacccagtttatcaaaagac
cagctcgaggagcatctgagtcctcttccatcttttgactattttgagttcttccccgct
gatcagagtttatacccacatctcttttcaagagcatacatcaacttcaaaaacccagag
gatatcattattttcagagatcgctttgatggctatgtattcattgataataaaggccaa
gagtatccagctgttgtagaatttgctccatttcagaaagtttcaaagaaaaatttaaag
aagaaagatgctaaagcaggaactattgaagaagacccagaatacaggcgatttctggaa
aattactcttgtgatgaggagaaatcaatggccaatccagaaacactattgggagagatt
gaagctaaaacccgagaactcatagccaaaaggacaacacccttgctggaatacatcaaa
aacaagaaattagagaaacagagaataagagaggaaaaaagagaggagaggcgaaggagg
gaactggaaaagaagcgacagagggaagaggagaagaggaagcgcagagaagaggagaga
cgaaagcggaaggaggctgaaaagcagaagaagctttctgaaaaggagataaagatcaag
cttttgaagaagtgtgatcgagacgatgacatggactcagacagactgaaagataaagca
gacagtggagagatagagaagaacagatgggaaaagccggcaggacacactaagtcaaag
gattccaaggataataggagtcaaattgagagtgacaaggagcagcgggaaggtcatggc
cgtcgccagagggacaaagagcatcgcggcagagatgaggagcgcaaacgacagaggcat
cactacgagtttgacaagtttatgcgacgcaaggaggagaccaaatggggtaaaggctac
tgccaggacagagccaagaaagaccaacatcatggctattcttactgctcagagactgga
gacaaactgggaaaagaggaacgagaggacaagggcagcaggaaagaacggattcgcaat
aagtctgtgttagtgcatcaggagaaaaggacttcccagtctgaggggccagaccagata
ggaggggctctgccagcaaaggaccgaccggcaatgcagctgtaccaacctggtgctaga
aaccgcaagcaaatgggctctgggaacaagacgtttgacttcccaccaatatctcccaaa
cacggaggagaacactgctacaagacggtcattggtacaggctcagagaagagtgccaac
gagtaa
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