Sulfobacillus acidophilus DSM 10332: Sulac_1771
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Entry
Sulac_1771 CDS
T01746
Name
(GenBank) DNA primase small subunit
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
sap
Sulfobacillus acidophilus DSM 10332
Pathway
sap03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Sulac_1771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sap03400
]
Sulac_1771
Enzymes [BR:
sap01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Sulac_1771
DNA repair and recombination proteins [BR:
sap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Sulac_1771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Flavi_NS4B
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
AEW05264
UniProt:
G8TZM4
LinkDB
All DBs
Position
complement(1722051..1722908)
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AA seq
285 aa
AA seq
DB search
MPNFVNGDLRIPHPERILFPQIGLTRRDLVEYYRRMAPPLLTEAGNKPLTVRRWPHGILG
PTFYQKHQPEGGPIRVHTVHELLRWVGQGVIEWHAPLGSTYRQHEWAVLDLDPEPQASWH
DVVAVATMVTTLLREVGWSYVMKTSGQDGLHIFCPIEPAEPPVVTAVMKYFAELMAAAAP
DLVTVERLKSKRQGRVYVDYLQNGAHRTMVMAYSVRATPDARISWPLMPDQLSLGPARWT
VGWVLDQPPTSWPPFDGSVLPPAALQDTVRRFGIRAETSTAAWKW
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacttcgtcaatggagatttacggattccccatccggaacgcatcttgtttccc
cagatcggactaacccgccgagatctggtggaatactaccgccggatggctccgccgcta
ttgaccgaagccgggaataagcccttgactgtgcggcgatggcctcatgggattttaggg
ccgacgttttaccaaaaacatcaacccgagggaggtcccattcgggtgcacacggtgcac
gaactcttgcgctgggtagggcaaggggtgattgaatggcatgcgccattggggtcgacc
tatcggcaacatgagtgggcggtgctggatctcgatccggaaccgcaggcgagttggcac
gatgtcgtcgcggtggcgacgatggtcaccacccttttgcgggaagtgggttggtcttat
gtcatgaaaacgtcaggccaagacggattgcacattttttgtcccattgaacccgcggaa
ccccctgtggtcacggcggtcatgaaatacttcgccgagctcatggctgccgcggccccc
gatttggtcacggtggaacgcctgaaatccaaacggcagggcagggtctatgtcgattat
ctacaaaacggtgctcaccggaccatggtcatggcctattccgtccgcgccaccccggac
gcccggatttcgtggccgttgatgcccgatcaattgagtctgggaccggcccgctggacg
gtcggttgggtcctcgaccagccgcccacatcatggccgccgtttgacgggagcgtcctt
ccgccggccgctcttcaagacaccgtcagacggttcggtatccgggcggagacgtctaca
gcagcttggaagtggtga
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