Scedosporium apiospermum: SAPIO_CDS5153
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Entry
SAPIO_CDS5153 CDS
T06367
Name
(RefSeq) TFIIH basal transcription factor complex p47 subunit
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03022
Basal transcription factors
sapo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SAPIO_CDS5153
09124 Replication and repair
03420 Nucleotide excision repair
SAPIO_CDS5153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapo03021
]
SAPIO_CDS5153
03400 DNA repair and recombination proteins [BR:
sapo03400
]
SAPIO_CDS5153
Transcription machinery [BR:
sapo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SAPIO_CDS5153
DNA repair and recombination proteins [BR:
sapo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SAPIO_CDS5153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Tnp_zf-ribbon_2
DUF4796
Motif
Other DBs
NCBI-GeneID:
27724225
NCBI-ProteinID:
XP_016642869
UniProt:
A0A084G6V8
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSDSDGEYVADDMSDDFMDHQVTSTTEARDASRSRRRDKKSHQKGGRKAAWEDVKRSWDT
VVEGQDGSLSIAEVIEAQKRKRLLRDTTPLERGIIRHLMLVIDMSFAMAEKDLLPTRYRL
TMTFAAEFVKEYFEQNPISQMGIIGMKDGVAVSVSEMSGNPTSHLEKVARWRDEEPKGNP
SYQNALEMCRGALFNTPSHGTREVLIVSGAILSSDPGDINETIASLIQNNIRVSIIGLAA
QVSICEEICRRTNAGDTTQYNVAMDEKHFRELFLDKTTPPVTRTEEQNAASLLMMGFPSR
TLASGTGINYCACHNKPLREGYRCTRCGTKVCRIPADCPGCGLTLILSTHLARSYHHLLP
LRNFVEVPWSEAARSTACFACQAPFPEPPKKGPSTEPPAPKPPEVKGVSESSRYACKNCH
SHFCVDCDVFCHETVHNCPGCEAGLRKPRARPVETNGNSTNGHTNGAMIID
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattccgatggcgagtacgtcgccgacgacatgtcggacgacttcatggaccac
caagtaacgagcacaaccgaagccagagacgcctccaggagtcgtcggcgcgacaaaaaa
agccaccaaaaaggcggacgcaaagcggcgtgggaagacgtcaagagaagctgggacacc
gtggtcgagggccaggacggcagcctatcgatagcggaagtgatcgaggcgcagaagcgc
aagaggttattacgggacacgacgcccctcgaaaggggaatcatacggcacctgatgctc
gtcatcgacatgtcgttcgccatggccgagaaggatctcctgccgacgaggtaccgactt
acgatgacgtttgcggccgagttcgtcaaggagtattttgagcagaatccgatttcgcag
atggggatcattgggatgaaggatggcgtggcggttagcgtgagtgagatgagtgggaat
ccgacgagtcatttggagaaggtggcgaggtggagggatgaggagccgaagggtaatcca
agctaccagaatgccttggagatgtgtcgcggtgcactattcaatacgccttcccatggc
acacgagaagtcctaatcgtctctggcgccatcctctccagtgaccccggcgacatcaac
gaaacgatagcaagcctcatccaaaacaacatccgcgtctccataatcggcctagccgcg
caagtatccatctgcgaagagatatgccgacggacaaacgccggcgacacgacgcaatac
aacgtcgccatggacgagaagcacttccgcgagctcttcctcgacaaaaccacaccgccg
gtaacccgcaccgaggagcagaacgccgcgagcctcctcatgatggggtttccctcgcgc
acgctcgcctcggggacgggtatcaactactgcgcctgccataataaacccctcagggaa
ggttaccggtgtacacgctgcggcacaaaagtctgccgcatacccgccgactgtcctggc
tgcgggctcacactcatcctctcgacgcatctcgccagatcctaccaccacctgttaccc
ctccgcaacttcgtcgaagtcccctggtcggaagccgcgaggtccacggcgtgcttcgcc
tgccaagcgccgttccccgaaccccctaagaagggcccttctactgagccgccagccccg
aaacctcctgaggtcaagggcgtaagcgagagcagcagatatgcttgcaagaactgccac
tcccacttttgcgtcgactgcgacgtcttttgccacgagacggtgcataattgccccggc
tgcgaagccggtctccgaaaacctagggctcggccggtggagactaacggaaactctacg
aatgggcacacgaacggtgcgatgatcattgattaa
DBGET
integrated database retrieval system