KEGG   Scedosporium apiospermum: SAPIO_CDS5902
Entry
SAPIO_CDS5902     CDS       T06367                                 
Name
(RefSeq) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03030  DNA replication
sapo03410  Base excision repair
sapo03420  Nucleotide excision repair
sapo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAPIO_CDS5902
   03410 Base excision repair
    SAPIO_CDS5902
   03420 Nucleotide excision repair
    SAPIO_CDS5902
   03430 Mismatch repair
    SAPIO_CDS5902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sapo03032]
    SAPIO_CDS5902
   03400 DNA repair and recombination proteins [BR:sapo03400]
    SAPIO_CDS5902
Enzymes [BR:sapo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SAPIO_CDS5902
    6.5.1.6  DNA ligase (ATP or NAD+)
     SAPIO_CDS5902
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SAPIO_CDS5902
DNA replication proteins [BR:sapo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    SAPIO_CDS5902
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     SAPIO_CDS5902
DNA repair and recombination proteins [BR:sapo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SAPIO_CDS5902
   NER (nucleotide excision repair)
    Other NER factors
     SAPIO_CDS5902
   MMR (mismatch excision repair)
    Other MMR factors
     SAPIO_CDS5902
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Ndc1_Nup
Other DBs
NCBI-GeneID: 27724974
NCBI-ProteinID: XP_016642447
UniProt: A0A084G5N6
LinkDB
Position
Unknown
AA seq 891 aa
MAPKQATLGYVKPAQTTIGRFFAQVDGTRPRAAPRQTTLSFSTKSNGPAEKKEVKEEIDA
GDVSPQSDTKKRSRAKNEELNASETESETKSIKEEAEAPPSKRARRNRKRIEDDEDEVMT
EASAPSPKPKKESPVRKRSRSRSRSPTSPVKPKSAKAAIGKAKASKIKKEEEEKEKDTEE
RSIVSSSEDEMEVLEEEEEERPEITAKARKEVQTIIASKGKDPYPDWKAGAPVPYAALCK
TFSLIELTTKRLQIMEHCSLFLRQVLRLTPDDLLPTVLLMINKLAPDYAGIELGIGESLI
MKAIGESTGRSLQIIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLTVRGVHQGLMSIATV
SGSGAQQRKVDLIKKLLSASDQNSTGKVDITKDKGGPSEAKFLIRFLEGKLRLGLAERTV
IVSLAQAVVAHEAEVKGKLPSTSDMEKGESILKQVYSELPSYDVIIPAMLEHGIMKLRDN
CKLKPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYLAKDAPKGEAEDL
KNATHLKADGVAAIFSRNSEDLSRKYPDILAKLHAWVKTDTKSFVLDCETVAWDVSEKKV
LPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLYLNGNPVVEKPLRERRELLTQSFVPVEGE
FAFATHMDSQELEDIQTFLDESVKASCEGLMVKMLDGGESGYEPSKRSRNWLKIKKDYLS
GVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPFSDTYETVCNIGTGFSEQVLEDLHSQ
LSEIVIERPKPFYSHSSGTQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCREGVDPSGEK
GISLRFPRFIRVRDDKKAVDATSSRQVAEMYRRQESVTKNKAPAVDDDFEY
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggccccgaagcaggccacacttgggtatgtgaagccggcccagacgacgatagggagg
ttcttcgcgcaggtggacgggacaagaccgagagcggcgccgaggcagactacgttatcg
ttctcgacgaaatctaatgggccagcggagaagaaggaggtgaaagaagagatcgatgct
ggcgatgtgtctccgcagagcgatactaagaagaggtcccgcgcgaaaaatgaagagcta
aatgcgtctgaaacggagtccgagacgaaatctatcaaagaagaggccgaggcgccacct
tcaaagagggcccgaaggaatagaaagaggatagaagacgacgaggatgaggttatgacc
gaggcatctgcgccttctcccaagcccaagaaggagagccctgttagaaagcgaagccga
agccggagtcgaagccctacaagtccagtaaagccgaaatctgctaaggcggcaattggt
aaggccaaggcttctaagattaagaaggaggaggaggagaaggagaaggatacggaagaa
cgcagcattgtttcgtcatccgaggatgagatggaggtgctggaggaagaggaggaagaa
cgtccagagattaccgcgaaagcgcgaaaggaggtacagacaataattgcctccaagggc
aaggatccttatcctgactggaaggccggtgcgcctgttccgtatgccgcgctttgcaag
accttctcgctcattgagctcacgacgaagcggttgcaaattatggaacactgctcgctc
ttcctccgccaggtccttcgtctcacacccgatgacttgctaccgactgtgcttctcatg
attaacaagctcgcccccgactatgcgggtatcgagcttggcattggcgagtcactcatt
atgaaagccattggggagagtacaggacggagtctgcaaatcatcaagcaggaccaaaag
gaaatcggcgaccttggtctcgtggccgtgaagagcaggtcgacccagccgaccatgttc
aagcccaagcctctaaccgtcaggggagtgcatcaaggactcatgagcatcgctactgtc
agtggcagcggtgcgcagcagcgcaaggtcgatctcatcaaaaagctactctcggcctct
gatcagaactccaccggaaaggtcgacatcacaaaggataagggaggcccaagcgaggcc
aagtttctcattcgattcctggaaggaaagcttagattgggtctggccgagcgcacagtt
atagtgtcacttgcgcaggctgttgtcgcccatgaagccgaggtgaaaggcaaactgccc
agcacgagcgacatggagaagggcgagagcattctcaagcaagtgtacagcgagctgccg
agctacgatgttatcattcccgccatgctcgaacacggcatcatgaagctacgggataac
tgcaagctgaaaccgggtgtgcctttgaagcccatgctagctaaacccacgaaggctatc
accgaagtcctagatcgtttcgagggccaaactttcacttgcgaatacaagtatgatggc
gagcgagcccagattcactacttggccaaggatgcccccaagggtgaagccgaagatctc
aagaacgcgactcatctcaaagcggacggcgtagccgccattttctctcgcaactcggaa
gacttgtccaggaaataccccgatatcctcgccaagcttcatgcctgggtcaagaccgac
acgaaaagcttcgtgcttgactgcgagacggtcgcctgggacgtcagcgagaagaaggtg
ctgccgttccagcagctcatgacgcgcaagaagaaggacgtcaagatcgaggacgtcaag
gtcaaggtctgcgtgttcgctttcgatttgctctatctcaacggtaaccccgtcgtggaa
aagcctctgcgcgagaggcgagagctgctcacgcagtcctttgtcccggttgagggagag
tttgcgtttgcaacgcacatggacagtcaggagctcgaggatatccagactttccttgat
gagagtgtgaaggcatcttgtgaaggtttgatggtgaagatgctggacggcggtgaaagc
ggatacgagcccagcaagcgaagtcgcaactggttaaagatcaagaaggactacctctca
ggcgtaggcgactctctcgatctcgtcgttctaggagcgtactacggcaagggcaagcgc
acatcagtctacggtgccttcctcctcgcctgctacaaccccttctccgacacctacgaa
acagtttgcaacatcggcaccggcttctccgagcaggtcctcgaggacctccactcccaa
ctctctgaaatcgttatcgagcgtcccaaacccttctattcccactcctcgggaacgcag
caccagcccgacgtctggttcgagccccgctacgtctgggaggtcaaaacggctgaccta
accctcagcccgcgctacaaggccggttgcagagagggcgtcgacccctcgggtgagaag
ggtattagtttgcgattcccgcgcttcatccgcgtgagggatgataagaaggctgtggat
gctacgtcgagtaggcaagttgctgagatgtataggcggcaggagagtgtgacgaagaat
aaggcgccggctgtggacgacgattttgagtattga

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