Scedosporium apiospermum: SAPIO_CDS6259
Help
Entry
SAPIO_CDS6259 CDS
T06367
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03022
Basal transcription factors
sapo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SAPIO_CDS6259
09124 Replication and repair
03420 Nucleotide excision repair
SAPIO_CDS6259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapo03021
]
SAPIO_CDS6259
03400 DNA repair and recombination proteins [BR:
sapo03400
]
SAPIO_CDS6259
Transcription machinery [BR:
sapo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SAPIO_CDS6259
DNA repair and recombination proteins [BR:
sapo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SAPIO_CDS6259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
27725331
NCBI-ProteinID:
XP_016641987
UniProt:
A0A084G4C6
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MATNSLQLGDYLEKLPGTTFRKLYQQPSTAFAIFRRMLPHLAKTIVMALLYMPKPMLYSD
LDIWVKPESERAKRHSLSVLRSLHIIMISVPGKGNKKQEIQLTANFKNSFRLALDGGGDH
NSFGVLSTLPIPPEVDLPFLERYARKKWDDILHFVVNSVGNRAGAESSSGPKLSVKELLL
AGRLVERRTGGHMGGAAGVGITQAGFTFLLQEANAQVWTMLLLWLEAADRSGAGQSVDML
SFLFVLASLELGRAYDTNALTEERRNMLPFLVDIGLIFIPSHKPQQYFPTRLATTLTSSS
SSLRTVSEGFAAVTSLTPTTTGTPTTTDTSAVTAPSTTSQKGSIIVETNYRIYAYTSNPL
QIAVLALFANLKMRFHEMVSGRLSRESIRRAISYGITADQIINYLAAHAHEQMRRKALAN
NKPVLPPTVVDQIRLWQLENERMKTTSGFLFKDFDDMKEYEACASYATEIGVCVWRSDKR
AMFFASKHEQIRDFLKLRKRAD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaactccctccagctcggggactacctcgagaagctccccggcaccacattc
cgcaagctctatcagcagccgtcgacggcctttgcgatattccggcggatgctgccccat
cttgccaaaactatcgtaatggccctcctttatatgccgaaaccgatgctctactctgat
ctagacatctgggtcaagcccgagtctgaacgcgccaaacgccactccctctccgtcctc
cgcagcctccacataatcatgatatccgtccccggcaaaggcaacaaaaagcaagaaatt
caactcacagccaacttcaaaaactccttccgcctcgccctcgacggcggcggcgaccac
aactccttcggcgtcctctccaccctccccatcccccccgaagtcgacctccccttcctc
gagcgctacgcccgcaagaagtgggacgacatactccacttcgtcgtcaacagcgtcggg
aaccgcgcgggtgccgaatcgtccagcgggcctaagctgtccgtcaaggagctcctgtta
gcggggcggttggtcgagaggaggacgggggggcatatggggggggctgcgggggttggc
attacgcaggccggctttacgttcctcctccaggaggccaatgcgcaggtgtggacgatg
ctgcttctttggctggaggcggctgatcgctcgggggccggccagagcgtcgacatgctc
tcgttcctcttcgtcctcgctagtctcgagctaggtcgcgcatacgatacgaacgccctc
acggaagaacgccgaaacatgctgcccttcctcgttgacatcggcctcatcttcatcccc
tcccacaaaccccaacaatacttccccacccgcctagctacgaccctcacctcctcatcc
tcctccctccgcaccgtctccgagggattcgccgccgtcacctccctcacacccacaacc
accggcaccccaaccacaaccgatacctcagccgtcaccgctccctcaaccacctcccaa
aagggcagcatcatcgtcgagaccaactaccgcatatacgcctacacctccaaccctctc
caaatcgccgtcctcgccctcttcgccaacctcaagatgcgtttccacgagatggtctcg
ggccgcctatcccgcgaatccatccgccgcgccatctcctacggcatcaccgccgaccag
atcataaactacctcgccgcccacgcccacgagcagatgcgtcggaaggccctcgccaac
aacaagcccgtcctgccgcccaccgtcgtcgatcagatacggctctggcagctcgagaac
gagcgcatgaagactacgtccgggttcttgtttaaggactttgacgatatgaaggagtac
gaggcttgtgcttcttacgcgacggagattggggtttgtgtttggaggagtgataaaagg
gctatgttttttgctagtaagcatgagcagattcgcgactttctcaagttgaggaagagg
gccgattga
DBGET
integrated database retrieval system
