Schlegelella aquatica: OMP39_00660
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Entry
OMP39_00660 CDS
T08587
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
saqa
Schlegelella aquatica
Pathway
saqa00521
Streptomycin biosynthesis
saqa00523
Polyketide sugar unit biosynthesis
saqa00541
O-Antigen nucleotide sugar biosynthesis
saqa01100
Metabolic pathways
saqa01110
Biosynthesis of secondary metabolites
saqa01250
Biosynthesis of nucleotide sugars
Module
saqa_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
OMP39_00660 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OMP39_00660 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OMP39_00660 (rfbC)
Enzymes [BR:
saqa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OMP39_00660 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UZD55142
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Position
142149..142721
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AA seq
190 aa
AA seq
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MNIRPAALPGVWLVEPVVHEDDRGYFMEAFHEADFAAAIGQPIRFVQDNQSGSRRGVLRG
LHYQLPPHAQGKLVRVLRGRILDVAVDLRRGSTHFGRWVAHELSDDNRLQVWIPPGFAHG
FLVLSDHAEVLYKVTAHHAPEAARTVRWDDPQLGIRWPLAAGQAPVLSARDASAPWLAEA
EVFGPYTCGP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccggcctgctgccttgcccggcgtgtggcttgtcgagcccgtcgttcacgag
gacgaccggggttacttcatggaagcgtttcacgaggccgacttcgccgcggcgatcggg
cagcccattcgcttcgtgcaggacaaccagtcgggctcgcggcgtggggtgttgcgcggc
ctgcactatcagctgcctccgcacgcccagggcaagctggtgagggtgctgcgcgggcgc
atcctcgatgtggcggtggacctgcgccgaggcagcacgcacttcggtcgctgggtggcg
cacgagctgagcgacgacaaccgcctgcaggtgtggattccgcccggcttcgcgcatggc
tttctcgtgctgtcggaccacgccgaggtgctctacaaggtcacggcccatcacgccccc
gaggccgcccgcaccgtgcggtgggacgacccgcagctcggcatccggtggccgctcgcg
gccggccaggcgcccgtgctctctgcgcgcgacgccagcgcgccctggctcgccgaggcc
gaggtgttcggcccctacacttgcggcccatga
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