Schlegelella aquatica: OMP39_04755
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Entry
OMP39_04755 CDS
T08587
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saqa
Schlegelella aquatica
Pathway
saqa03420
Nucleotide excision repair
saqa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OMP39_04755
03430 Mismatch repair
OMP39_04755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saqa03400
]
OMP39_04755
Enzymes [BR:
saqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OMP39_04755
DNA repair and recombination proteins [BR:
saqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OMP39_04755
MMR (mismatch excision repair)
Other MMR factors
OMP39_04755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UZD55893
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Position
1050154..1052493
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AA seq
779 aa
AA seq
DB search
MTASSALLAHLNHEQLAAVTLPAAHALILAGAGSGKTRVLTTRIAWLIHTGQVSPAGVMA
VTFTNKAAKEMLTRLGAMLPIPVRGMWIGTFHGLCNRFLRAHWKLAGLPQSFQILDAQDQ
LSAVKRVIKAMNLDEERFVPKQVAWFIAGSKEEGLRPKDVDVRDEHGRKLVEIYQAYEDQ
CQREGVVDFAELLLRTYELMRDNAALREHYQHRFRHILVDEFQDTNRLQYAWLKMFTGAH
NSLFAVGDDDQSIYAFRGAQVGNMADFEREFRVPHVIKLERNYRSFGNILDAANALISHN
TRRLGKNLRTEAGPGEPVRVYEATSDYAEAQWLLEEAQQLHRDGTPRSEIAVLYRSNAQS
RVIESALFNAGIPYRVYGGLRFFERAEIKHALAYLRLIENPNDDTSYLRVVNFPTRGIGA
RTLEQLQDAARVSGRSLYQSVGAVTGKGGANLAAFNALVDAMRENTRGLTLREIIEHVVE
ASGLADHYRNEKEGRERLENLDELVNAAEAFVTQEGFGKDAVALPVDEQGVVAGLVPGAL
AAGDPPAPAPVEVAPDAETGEIVSPLAAFLTHAALEAGDNQAQAGQDAIQLMTVHAAKGL
EFDCVFITGLEEGLFPHENSLSDYDGLEEERRLMYVAITRARKRLYLSFSQTRLLHGQTR
YNVKSRFLDELPEGALKWITPRVQGFGSGFARDYQAAWASGSGLGSIVGAGRLPAASAPV
TTADGVALRVGQSVFHTKFGEGVIVTLEGQGTDARAQINFGRHGTKWLALSVAKLTPVD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttcctctgccctgcttgcccacctgaaccacgaacaactggcggccgtgacg
ctgcctgcggcgcacgcgctcatcctggcgggcgccggctcgggcaagacgcgggtgctg
accacgcgcatcgcgtggctgatccacacggggcaggtctcgccggccggcgtgatggcg
gtcaccttcaccaacaaggcggccaaggagatgctcacgcgcctcggtgcgatgctgccc
atccccgtgcggggcatgtggatcggcactttccacgggctgtgcaaccggttcctgcgc
gcgcactggaagctcgcgggcctgccgcagagcttccagatcctggacgcgcaggaccag
ctctcggccgtcaagcgcgtcatcaaggcgatgaacctcgacgaggagcgcttcgtgccg
aagcaggtcgcgtggttcatcgccggcagcaaggaggagggcctgcgcccgaaggacgtg
gacgtgcgcgacgagcacggccgcaagctggtggagatctaccaggcctacgaggaccag
tgccagcgcgagggcgtggtggacttcgccgaactgctgctgcgcacctacgagttgatg
cgcgacaacgcggcgctgcgcgagcactaccagcatcgctttcgccacatcctcgtggac
gagttccaggacaccaaccggctccagtacgcctggttgaagatgttcaccggggcgcac
aacagcctgttcgcggtgggcgacgacgaccagagcatctacgccttccgcggtgcgcag
gtcggcaacatggcggacttcgagcgcgagttccgcgtgccgcacgtgatcaagctggag
cgcaactaccgcagcttcggcaacatcctcgatgcggccaatgcgctcatctctcacaac
acgcggcggctgggcaagaacctgcgcaccgaggcagggcccggcgagccggtgcgcgtc
tacgaggccaccagcgactacgccgaggcccagtggctgctggaggaagcgcagcagctg
caccgcgacggcacgccgcgctcggagatcgccgtgctgtaccgctcgaacgcgcagtcg
cgggtgatcgaaagcgcgctcttcaacgccggcattccctaccgcgtgtatggcggcctg
cgcttcttcgagcgcgccgagatcaagcacgcgctcgcctacctgcggctcatcgagaac
ccgaacgacgacacctcctacctgcgcgtggtgaacttcccgacgcgcggcatcggagcg
cgcacgctcgagcagttgcaagacgcagcgcgcgtctccgggcgcagcctctaccagagc
gtgggtgcggtcaccggcaagggcggcgcgaacctcgccgccttcaacgcgctcgtcgat
gccatgcgcgagaacacgcggggcctgacgctgcgcgagatcatcgagcacgtggtcgag
gcgtcgggcctggcggatcactaccgcaacgagaaggaaggccgcgagcggctggagaac
ctggacgagctggtcaacgcggccgaggcgttcgtgacgcaggagggcttcggcaaggac
gcggtggcgctgccggtggacgaacagggcgtggtcgccggcctggtgccgggcgcgctg
gccgccggcgatccccccgcaccggcgcccgtggaggtggcccccgatgcggagacgggc
gagatcgtttcgccgctggccgccttcctgacgcatgcggcgctggaggcgggcgacaac
caggcgcaggccgggcaggacgccatccagttgatgacggtgcatgccgccaagggcctc
gagttcgactgcgtgttcatcaccgggctggaggaggggctcttcccgcacgagaactcg
ctgtccgactacgacggcctggaagaggagcgccggttgatgtacgtggcgatcacccgc
gcgcgcaagcggctgtacctgagcttcagccagacgcggctgctgcacggacagacgcgc
tacaacgtcaagagccgcttcctggacgaactgcccgagggggccctgaagtggatcacc
ccgcgggtgcaaggcttcggttcgggcttcgcgcgcgactaccaggcggcgtgggcgagc
ggctcgggcctggggtccatcgtgggggcggggcgtctgcccgcggcgagcgcaccggtg
acgaccgccgacggggtcgcgctgcgtgtcgggcagtcggtcttccacaccaagttcggc
gagggtgtgatcgtgaccctcgagggccagggcaccgatgcgcgtgcgcagatcaacttc
ggccggcacggcacgaagtggctggccctctcggtggccaagctcaccccggtggactga
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