KEGG   Sorex araneus (European shrew): 101539887
Entry
101539887         CDS       T07854                                 
Symbol
ELL
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
sara  Sorex araneus (European shrew)
Pathway
sara03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101539887 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sara01009]
    101539887 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sara03021]
    101539887 (ELL)
Protein phosphatases and associated proteins [BR:sara01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101539887 (ELL)
Transcription machinery [BR:sara03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     101539887 (ELL)
    Little elongation complex (LEC)
     101539887 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL DUF3450 Uds1 DUF6185
Other DBs
NCBI-GeneID: 101539887
NCBI-ProteinID: XP_004616707
LinkDB
Position
Unknown
AA seq 595 aa
MAALKEARSYGLSCGRVSDGSRVSVFHVKLTDSALRAFESYRACQGTASLRPSIQFQGSQ
GHICIPQPNGATESRTFSFYLTNVGRDGPQGSFDCIQQYVSSHGDEQLDCLGSVQDKITV
CATDDSYQKARQSLAQAEEETRSRSAIVIKPGGRYLGKRVQFRKPAPGATEAVPSRKRAT
PISLASAVRRGGAGSVAQRPFRDRVLHLLALRPYRKAELLLRLQRDGLATADRDALDGLL
QQLANVDARDGACTLKDSVYRDVQRDWPGYSEGDQQLLKRVLVRKLLQPQGAGALSGESA
STSPSGEHDCSASPLQKRPPPPPDFIDPLAPKKPRISHFTQRTQPIANGKLSVPHSREAL
LPTPGPLAAMDTPLPPRLEPPRAHDPLADVSNDLGHSGRDCERREVAGPAPSAPPTCASP
SRPLGPARSKAKKRSKKHRLRERAEAQPHTQPPALAPDAPGLNGTCSSSSVPTPTSTSET
PDYLLKYAPIVSSEQRQSYKNDFNAEYTEYRGLHARIELVTRRFTQLDAQLRQLTQGSTE
YETTRGQILQEYRKIKKTNTNYSQEKRRCEYLHSKLAHIKRLIAEYDQRQLHAWP
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggctcggagctacgggctgtcgtgcgggcgggtcagcgacggc
agccgggtgtcggtgtttcacgtgaagctcaccgacagtgcactgagagccttcgagagc
taccgcgcctgccagggcaccgcgtcactgagaccgtccatccaatttcaaggaagccag
gggcacatctgcatcccccagcccaacggtgccaccgagtcgcgcaccttctccttctac
ctcaccaacgtgggccgcgacggcccacagggcagcttcgactgcatccagcagtacgtg
tccagccatggggatgagcagctggactgcctgggcagcgtccaggacaagatcacggtg
tgcgccactgatgactcctaccagaaggcgcggcagagcctagcacaggccgaggaggag
acgcgaagccgcagcgccatcgtcatcaagccggggggccgctacctggggaagagggtg
caattccggaagccggcgcctggggccacggaggccgtgccctcccgaaagcgcgctact
cccatcagcctggcgagcgccgtgcggcggggcggggcgggcagcgtggcacagaggccc
ttccgggaccgagtgctgcacctgctggccctgaggccctaccgcaaggcggagctgctg
ctgcggctgcagagggacggcctggccaccgccgacagggatgccctggacggcctccta
cagcagctggccaacgtggatgcccgggacggcgcgtgcacccttaaggacagtgtctac
agggatgtgcagcgtgactggcccggctactcggagggtgaccagcaactgctgaagcgc
gtgctggtcaggaagctgctgcagccgcaaggggccggagcgctctctggagagtctgcc
agcaccagcccttcaggggagcatgactgctcagcctcacccctgcagaaacggccgcca
ccgcctcccgacttcatcgaccccctggcccccaagaagccccggatctcacacttcacc
cagagaacccagcccatcgccaacgggaagctgagtgtaccccacagccgggaggccctg
ctgcccaccccaggcccgctggccgccatggacacccccctgcccccacggctggagccc
ccgcgcgcccacgaccccctggctgatgtcagcaatgacctgggccacagtggtcgggac
tgtgagcggcgggaagtggccggtccggccccatcagcgcccccgacctgtgcgtcaccc
agccgcccactcgggcctgcacgcagcaaggccaagaagcgatccaagaagcacaggctc
agggagcgggcggaggcccagccccacacccagccgccggccctggcgcccgacgccccg
gggctcaacgggacctgcagcagctccagtgtccctacccccacgtccacctcggagacc
cccgactacctgctgaagtacgcgcccatcgtgagctctgagcagcgacagagctacaag
aatgacttcaacgccgagtacacagagtaccggggcctgcacgcccgaatcgagcttgtc
acgaggcgcttcacgcagcttgacgcacagctaaggcaactcacgcagggctccactgag
tacgagaccacccggggccagatcttgcaggagtatcgcaagatcaagaagaccaacacc
aactacagccaggagaagcggcgctgcgagtacctgcacagcaagctggcacacatcaaa
cgcctcatcgccgagtacgaccagcggcagctgcacgcctggccctag

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