Sorex araneus (European shrew): 101539999
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Entry
101539999 CDS
T07854
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03082
ATP-dependent chromatin remodeling
sara04714
Thermogenesis
sara05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101539999 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101539999 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101539999 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101539999 (ARID1B)
03021 Transcription machinery [BR:
sara03021
]
101539999 (ARID1B)
03036 Chromosome and associated proteins [BR:
sara03036
]
101539999 (ARID1B)
Transcription factors [BR:
sara03000
]
Eukaryotic type
Helix-turn-helix
ARID
101539999 (ARID1B)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101539999 (ARID1B)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101539999 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101539999
NCBI-ProteinID:
XP_004601151
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MAPATALSVPMSGAPRPKPPWPEPWEAAAPSQRVHLSPSLGSPMDPMAMKRPQLYGMGGN
PHSQPPQSGPYPAGSYGPPGPQRYPMALQGRTPGAMGGMQYPQQQMPPQYGQQGVGGYCP
QGQQPYYNQQPQHVPPQAQYLPSQPPRYQQDMSQEGYGTRSQPSLAPGKPNHEDLNLIQQ
ERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLPGIP
GGPSPSPVGSPVGSTQSRSGPISPASIPGSQLPPQAPGSQSEPSSHPALSQSPMPQERGF
MAGSQRNAPMAQYGPQQGGPSMASHPSPGGQLHPGISGFPQSNSSGTYGPQMGQYGPQGN
YSRPPTYSGVPSASYSGPGPGMGINANNQMHGQGPSQPCGAMPLGRMPPAGMQNRPFAGN
MGSMTPGSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGLNQGGL
MASGSPYSQPVNNSAGLANAQAPAYSMASNMVNSSTASMGLADMMSPGESKLPMTLKADG
KEEGAAPADSKAKDSYSSQGVSQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWP
KTPSSPKSSSSTTTGDKITKVYELGNEPERKLWVDRYLTFMEERGSPVASLPAVGKKPLD
LFRLYVCVKEIGGLAQVNKNKKWRELATSLSVGTSSSAASSLKKQYIQYLFAFECKIERG
EEPPPEVFSSGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTP
HGQMTPMQGGRSSTVSVHDPFSDASESSFPKRNSMTPSAPYQQGLGLPDVMGRVPYEPNK
DPFGGMRKVPGSSEAFLAQGQMPASSMQDVYNQSPSGAMSALGMGQRQQFPYGASYDRRH
EPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDVYGVQYGGQ
QPELYNQYGGSFPGPERRPLQGQYPYPYSRERMAGPGQMQPHGLPPQMLGGPMPSSSGDG
PQQGMWAARNDMPYPYQNRQGPGGPAQAPPYPGMNRTDEMMVPDQRINHESQWPSHVSQR
QPYMSSSASMQPITRPPQPPYQNPPSLPNHISRAPSPASFQRSLDSRVSPSKSPFLPSMK
MQKVMATAPSAQVSGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRV
MMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILM
EYEVGDPSQKALDHHAARREEGQDEEDAGCLDEEDEDEEDEEEDPEKPAPGEERGAGTPP
SPEAAATAEKPRQASKFDKLPIKIVKKNNLFVVDRSARLGRVQEFDSGLLHWQLGGGDTT
EHIQMHFESKMEIPPRRRPPAPPGPAGRKREPAGGGDGSDLPPPPPPSERGIVATIDDVL
SARPGALPEDAPPGPPFGIHQAKSHRNIRLLEDEPRSRDEAPLCTVAHWQDSLAKRCICV
SNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEDDEDKGVACS
RGEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPVLDGLLHWMVCPSAEAQDPFP
TVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCR
EMSMALLSNLAQGDALAARAIAVQKGSIGSLIGFLEDGVTMAQYQQSQHNLLHMQPPPLE
PPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVVCDVLFQIGQ
L
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgccaccgccctgagtgttcccatgtcaggcgccccccggcccaagcccccg
tggcctgagccctgggaggcggcagcgcccagtcagcgcgttcacctgtccccgtccttg
ggcagcccgatggaccccatggcgatgaagaggccccagctctacgggatgggcgggaac
cctcactcgcagcccccgcagagcggcccgtaccccgcaggctcctacgggcccccgggc
ccccagcggtatccgatggcactccagggtcggacccccggcgccatgggggggatgcag
tacccgcaacagcagatgccgccgcagtacggacagcagggcgtgggcgggtactgcccg
cagggccagcagccctactacaaccagcagccgcagcacgtcccgccgcaggcgcagtac
ctgccgtcccagcccccgcggtaccagcaggacatgtctcaggaaggctacggaactagg
tctcaaccttcgctggctcccggaaagcccaaccatgaagacttgaacttgatccaacag
gaaagaccatccagtctaccagacctgtccggctccattgatgacctgcccacaggaacg
gaggccacgctgagctcagcagtgagcgcgtccgggtccacgagcagccagggggaccag
agcaacccggcccagtcgcctttctctccgcacgcgtccccgcacctgccgggcatcccc
gggggcccgtcgccgtcccccgtcggctcgcccgtggggagcacgcagtcacgctccggt
cccatctctcctgccagcatcccaggcagccagctgcctcctcaggctcccgggagccag
tcagagcccagctcccatcctgccctgagccagtcaccaatgccacaggaaagagggttc
atggcgggctcccagaggaacgctccgatggctcagtacggaccccagcagggcgggccg
tccatggcgtcccacccgtctcccggcggccagctgcaccccgggatcagcggcttcccg
cagagcaactccagcggcacttacgggccccagatgggccagtacggaccccaaggtaac
tactccaggcccccaacatacagcggggtgcccagcgcaagctacagcggcccggggcct
ggcatgggcatcaatgccaacaaccagatgcatggccaagggccaagccagccgtgcggt
gctatgcccctgggccggatgccacccgccgggatgcagaacaggccgtttgctggaaac
atgggcagcatgacccctggttcgcccggcatgtcccagcaaggggggccaggaatggga
ccacccatgccgaccgtgaaccggaaggcgcaggaggcagctgccgcagtgatgcaagcc
gcagccaactcggcccagagcaggcaaggcagcttccccggcctgaaccagggcggactc
atggcctccggctctccctacagccagcccgtgaacaacagcgccggcctggccaacgcc
caggcgcccgcctacagcatggcgtccaacatggtcaacagctccacagcgtctatgggt
cttgcagatatgatgtctccgggggagtccaagttgcccatgaccctcaaggctgacggc
aaagaggaaggcgccgccccggccgacagcaaggccaaggacagctacagctcgcagggg
gtctctcagccccccacccccggcaacctgcccgtcccgtccccgatgtcgcccagctcc
gccagcatctcctccttccacggcgacgagagcgacagcatcagcagcccgggctggccc
aagaccccctccagccctaagtccagctcgtccaccaccaccggggacaagatcaccaag
gtgtacgagctggggaacgagccggagcggaagctgtgggtggaccgctacctgaccttc
atggaggagcggggctcgcccgtggccagcctgccggccgtgggcaagaagcccttggac
ctgttccgcctctacgtctgcgtcaaagagatcggaggcctggcccaggtcaacaagaac
aagaagtggcgggagctggccaccagcctgagcgtgggcacgtccagcagcgcggccagc
tccctgaagaagcagtacatccagtacctgttcgccttcgagtgcaagatcgagcgcggg
gaggagccgccgcccgaggtcttcagctcgggcgacaccaagaagcagcccaagctgcag
ccgccctctcccgccaactcagggtctctgcaaggcccccagaccccccagtcgacgggc
agcaactcgatggccgaggttccgggcgacctaaagccgcccacgccggcgtccaccccg
cacggacagatgaccccgatgcaagggggcagaagcagcaccgtcagcgtgcacgacccc
ttctcggacgccagcgagtcttctttccccaagcgcaactccatgaccccgagcgccccc
taccagcagggcctgggcctcccggacgtgatgggcagggtgccctacgagcccaacaag
gaccccttcggcgggatgcggaaagtgcctggcagcagtgaggccttcctggcgcaggga
cagatgcccgccagcagcatgcaggacgtgtacaaccagagcccctcgggggccatgtct
gccctgggcatggggcaacggcagcagttcccctacggagccagttatgaccggaggcat
gagccctacgggcagcagtacccgggccaggggcccccctcaggacagccgccgtacgga
gggcaccagcctggcctgtacccacagcagcccaactacaagcgccacatggacggcatg
tacgggccccccgccaagcgccacgagggagacgtgtacggcgtgcagtacggcggccag
cagcccgagctctacaaccagtacgggggctccttcccgggccccgagcggcggccactg
cagggccagtacccctacccctacagccgggagcggatggccggcccgggccagatgcag
ccgcacgggctcccgccgcagatgctgggcggcccgatgccctcgtcctcgggcgacggg
ccgcagcagggcatgtgggcggcgcgcaacgatatgccttacccctaccagaaccggcag
ggccccggcggccccgcgcaggcgcccccctacccgggcatgaaccgcaccgacgagatg
atggtgcccgatcagaggatcaaccacgagagccagtggccttcccacgtcagccaacgt
cagccttacatgtcgtcgtccgcctccatgcagcccatcacgcggcccccgcagcccccc
taccagaacccgccgtcactgccaaaccacatctcccgggcgcccagccccgcctccttc
cagcgctccctggacagccgcgtctccccgagcaagtctccgttcctgccgtccatgaag
atgcagaaggtcatggccacggcgccctcggcccaggtctccgggccgcccccgcagccc
ccgcccatccggcgggagatcaccttccccccaggctcggtggaggcctcgcagcccgtc
ctgaaaccaaggcgaaagattacctcaaaagacatcgttactccggaggcctggcgtgtg
atgatgtccctaaagtcaggtctcctggccgagagtacgtgggccctggacactattaat
atactcctgtatgacgacagcactgtcgcgaccttcaacctctcccagttgtctggattt
ctcgaacttttagtcgagtactttaggaaatgcctgattgacattttcgggatcctgatg
gagtatgaggtgggcgaccccagccagaaagcacttgaccaccacgcggccaggagagag
gagggtcaggacgaggaggacgccggctgcctggacgaggaggacgaggacgaggaggac
gaggaggaagaccccgagaagccggccccgggcgaggagaggggcgcagggaccccgccc
tcgcccgaggccgccgccaccgccgagaagcccaggcaagccagcaagttcgacaagctg
cccatcaagatcgtcaagaagaacaacctgttcgtggtggaccgctcggcccggctgggc
cgcgtgcaggagttcgacagcgggctcctgcactggcagctgggcggcggcgacaccacc
gagcacatccagatgcacttcgagagcaagatggagatcccgccccggcggcggccgccc
gcgcccccgggtcccgcaggccgcaagagggagccggccgggggaggcgacggctccgac
ctgccgccgccgcccccaccctccgagaggggcatcgtggccaccatcgacgacgtgctg
tcggcgcgcccgggggccctgcccgaagacgccccgccgggcccccccttcggcatccac
caggccaagagccaccggaacatccggctgctggaggacgagccccgcagccgggacgag
gcgccgctgtgcaccgtggcccactggcaggactccctggccaagcgctgcatctgcgtg
tccaacatcgtccgcagcctgtccttcgtgcctggcaacgacgccgagatgtccaaacat
ccgggcttggtgctgatcctggggaaactgatcctcctccaccacgagcaccccgagagg
aagcgggccccgcagacctatgagaaggaggacgacgaggacaagggggtggcctgcagc
aggggcgagtggtggtgggactgcctcgaggtcttgcgggacaacacgctggtgacgctc
gccaacatctcggggcagctggacctgtccgcctacacggagagcatctgcttgccggtc
ctggacgggctgctgcactggatggtgtgcccgtccgccgaggcccaggaccccttcccg
acggtggggcccaactccgtgctgtccccgcagagactcgtgctggagaccctctgtaag
ctcagcatccaggacaataacgtggacctgatcctggccacgccgcccttcagccggcag
gagaagttctacgccacgctcgtgcggtacgtgggcgaccgcaagaacccggtgtgccgg
gagatgtccatggcgctcttgtcgaacctggcccagggggacgcgctggcggcccgggcc
atcgccgtgcagaagggcagcatcggcagcctgatcggcttcctggaggacggggtgacc
atggcccagtaccagcagagccagcacaacctcctgcacatgcagccgccgcccctggag
ccgcccagcgtggacatgatgtgccgggcggccaaggccctgctggccatggcgcgcgtg
gacgagaaccgctcggagttcctcctgcacgagggccgcctgctggacatctccatctcg
gccgtgctgaactcgctggtggcgtcggtggtgtgtgacgttctctttcagatcgggcag
ttatga
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integrated database retrieval system
