Sorex araneus (European shrew): 101550851
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Entry
101550851 CDS
T07854
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101550851 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sara04054
]
101550851 (DHX58)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101550851 (DHX58)
Pattern recognition receptors [BR:
sara04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
101550851 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
101550851
NCBI-ProteinID:
XP_004608834
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MTLRPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKKHLATVDRAKVVVLVNRVHLV
TQHLEEFSRMLDKRSSIATLSGDMGPRPGFGHLARKNDLLICTAELLQMALSSQEQEEHV
ELNDFSLLVVDECHHTHKGTVYNVILSRYLEQKLCGAQRLPQVLGLTASPGTGGANTLKG
AVEHILQLCANLDTQLIMSPQKSLPELQEHNHQPCKKYDLCHRRSEDPFGDMLKNLMDQI
HDRMEMPELSRDFGTQAYEQKVVELMRDAAQAGLLDRRVFALHLRHYNDALLIHETVRAV
DALAVLQDFYDRERTTKTWVLHAERWLMELFKDHRHELTRLAQCGPENPKLEMLEQILQE
QFGSQGRPQGLIFTRTRQSAHSLLLWLQQQPGLQTVDIRAELLIGAGSGSSQNTHMTQKG
QQEVIQKFRQGSLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARANQSLY
TFVATKNSRELRREQTNEVLETLMEQAVATVQKMDRAEFQTKLRELQCSALVHRAAQAAQ
RERQQQQFLAEEVQLLCINCMVAVGHGSDLRKVEGAHHVNVNANFSIYYNVSQQPVAIEK
VFKDWTPGGVISCRNCGELWGLQMVYKSVKLPALKVRSMLLQTPQGRIQAKKWSRVPFPV
PDFNYLQHCAQSLSLD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcgtccctaccagtgggaggtgatcatgcccgccctggagggcaagaatatt
atcatctggctgcccacgggcgccgggaagacccgggcagccgcctacgtggccaagaag
catttagcgactgtggacagagccaaggtggttgtcctggtcaacagggtgcatctggtg
acccagcatcttgaggagtttagcagaatgctggacaaacgctcgtccatcgccaccctg
agcggggacatggggccacgacctggctttggccacctggccaggaaaaacgacctgctc
atctgcacagctgagctgctgcagatggcgctgagcagccaggagcaggaggaacacgtg
gagctcaatgacttctccctgctcgtggtggatgagtgtcaccacacgcacaaaggcacc
gtctacaacgtcatcctgagccggtacctggagcagaaactctgcggggcgcagcgcctg
ccccaggttctgggtctcacagcgtccccaggcaccggaggggccaacacgctcaaaggg
gccgtcgagcacatcctgcagctctgtgccaacctggacacacagctcatcatgtcaccc
cagaagagtcttcctgagctgcaggaacacaaccaccagccctgtaagaagtacgacctc
tgccacaggcgcagtgaggacccctttggggacatgctgaagaacctcatggaccaaatc
catgaccgcatggagatgcccgagctgagtcgggacttcgggacgcaggcctatgagcag
aaggtggtggagctgatgcgagatgctgcgcaggctgggcttctcgatcggcgggtgttc
gcgctccacctgcggcactacaatgacgccttgctcatccacgaaacggttcgcgctgtg
gatgctctggccgtgctgcaggatttctatgacagggagcgcaccaccaagacctgggtc
ctgcatgccgagcgctggctaatggagcttttcaaagaccacaggcatgagctgactcgc
ctggcgcagtgtggtccggagaaccccaaactggagatgctggaacagatcctgcaggag
cagttcgggagccagggcaggccccagggcctcatcttcacccgcacccgtcagagcgct
cactcgctcctgctctggctccagcagcagcctggcctgcagaccgtggacatcagggcc
gagctgctcattggggcaggcagcggcagcagccagaacacccacatgacccagaagggg
cagcaggaagtgatccagaaattccggcaaggctcactgaacctcttggtggccaccagt
gtggcagaggaggggctggacatcccccagtgcaatgtggtcgtgcgctacggcctcctg
accaacgagatctccatggtccaggccagaggccgagcccgggctaaccagagcttgtac
acctttgtggccaccaagaacagccgggagctgcggcgggaacagaccaacgaggttctg
gagaccttgatggagcaggcggtggcgactgtgcagaaaatggatagagccgagttccag
accaagctgcgggagctgcagtgctcggccctggtgcatcgcgcggcgcaggcggctcag
cgagagaggcagcagcagcagttcctggcggaggaggtgcagttgctctgcatcaactgc
atggtggccgtggggcacgggagcgacctgcgaaaggtggagggtgcccaccacgtcaac
gtgaatgccaacttctcgatctactacaatgtctcccagcagccggtggccattgagaaa
gtcttcaaggactggacccctgggggtgtcattagctgtaggaactgtggggagctctgg
ggtctacagatggtctacaagtcggtgaagctgccggctctcaaggtccgtagtatgctg
ctccagaccccgcaagggcggatccaggccaagaagtggtcccgtgtgcccttcccggtg
cccgacttcaactacttgcagcactgtgcccagagcctgtccttggactga
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