Sorex araneus (European shrew): 101550862
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Entry
101550862 CDS
T07854
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03250
Viral life cycle - HIV-1
sara04623
Cytosolic DNA-sensing pathway
sara05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101550862 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101550862 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101550862 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sara03400
]
101550862 (SAMHD1)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101550862 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
SAM_2
HD_assoc_2
PDEase_I
SAM_1
Motif
Other DBs
NCBI-GeneID:
101550862
NCBI-ProteinID:
XP_004612699
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSGNFASALEPFGPSSLSSSRLPPDYRVWDSEQVCLYLSSQGVDDPALLRRFQESQIKGS
ELPLIDEFRLENLGVSSLEKRKGLRKILQQVNQYQNQCHADIMKVINDPVHGHIELHPLL
IRIIDTPQFQRLRYIKQLGAGYYVFPGASHNRFEHSLGVGYLAGCLVRTLREKQPELQIS
HRDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDVKWTHELGSVKMFEHLIKSNGLND
VMQYYGLVPDEDICFITEQIIGPPYPPTELCPWPYKGRPKEKGFLYEIVANKRNGIDVDK
WDYFARDCHHLGIKNSFDYQRFIKFARVCEVEDGKHICTREKEVGNLYDMFHTRNTLHRR
AYQHKVSNIIDTMITDALLKADCFIEITGAEGKKYSISTAIDDMEAFTKLTDNVYQQILY
SNDPKLEAAQKILKKIECRELYKYVGETQPMKQIKIQREDFQNLPEEVANAKPEGVFSDA
EMEAELKAEDFIVDVSQLLPERFAEQLIRVYCKKMDEKSLYRARQHFVQWCLLKNFTKPQ
DGDVVAPLITPRKREWNFAGLPQSPAEIRETSVRTRLLF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaacttcgcgtcggctttggaacccttcgggccctccagtttatcctctagc
cggctgcccccggattaccgcgtgtgggactcggagcaggtgtgcctgtacctcagcagc
caaggtgtcgatgatcccgcgctgctgaggcgcttccaagaaagtcagatcaaaggctca
gaactgccccttattgatgagtttcgccttgaaaatctcggagtaagttccttggaaaag
agaaagggtttaagaaaaatattacaacaagtgaatcaataccaaaatcaatgccatgct
gatataatgaaggtaattaatgaccctgtccatggccacattgaacttcaccctctcctc
atacgaatcattgacactcctcagtttcagcggcttcggtatattaaacagttgggagct
ggttactatgttttcccaggagcttcacacaatcgatttgaacacagtctaggtgtagga
tatcttgcaggttgtctagttcgtacgctgcgtgaaaaacagccagagctgcaaataagt
catcgagatatgctctgtgttcagatagctgggctttgtcatgatcttggtcatggtcca
ttttctcatatgtttgatggaagatttattccacttgctcgcccagatgtgaagtggacg
catgaactaggctcagttaagatgtttgagcacttaataaagtctaatggactcaacgat
gtcatgcaatactatggacttgtccctgatgaagatatttgctttatcacggaacagatt
ataggaccaccttatccaccaacggaattgtgtccttggccatacaaagggcgtcctaaa
gagaaaggcttcctttatgaaatagtggctaataaaagaaatggcattgatgtggacaaa
tgggattattttgctagggactgtcatcatcttggaataaaaaatagttttgattatcag
cgttttattaaatttgcccgtgtctgtgaagtagaggatggaaagcatatttgtacaaga
gaaaaggaggttgggaatctttatgatatgttccacacacgcaacaccttgcatcgtaga
gcttatcagcataaagttagtaacatcattgatacaatgattacagatgctttgctcaaa
gcagactgcttcatagagattacaggcgccgaaggaaaaaagtacagtatttctacagcg
attgatgacatggaagctttcacaaaattaacagataatgtttatcaacagattctgtac
tctaatgatcccaaattggaggcagcgcaaaagattttaaagaaaattgaatgccgtgaa
ctgtacaagtatgtgggtgagactcagccaatgaaacaaataaagatacagagggaagat
tttcaaaaccttccagaagaggttgccaatgctaaacctgagggagtattttcagatgct
gaaatggaagctgaactgaaagctgaagatttcatagtagatgtctcacagcttttacca
gagagatttgcagagcagctcattcgagtatactgcaaaaagatggatgaaaaaagttta
tatagagcacggcagcattttgttcagtggtgcttattgaaaaatttcactaaaccacag
gatggcgatgtggttgccccccttataacacctcgaaaacgggagtggaatttcgcaggt
ttaccccagagtcccgctgaaatccgggaaacgtctgtcagaacacggctgcttttctaa
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