Salmo salar (Atlantic salmon): 100196276
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Entry
100196276 CDS
T04363
Symbol
cnot7
Name
(RefSeq) CCR4-NOT transcription complex subunit 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100196276 (cnot7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196276 (cnot7)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100196276 (cnot7)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100196276 (cnot7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
100196276
NCBI-ProteinID:
XP_014068307
UniProt:
A0A1S3SVE3
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Position
ssa09:75587121..75617841
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AA seq
286 aa
AA seq
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MPAATVDHSQRICEVWADNLDEELKRIRQVIRKYNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEEEGIETLYLAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSNLPEEEVD
FFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSAYVQNGTGNAYEEEANKQLS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcggctactgtggatcatagccaaagaatatgtgaggtttgggctgacaacctg
gatgaagaactcaaaaggatccgccaggtcattcgaaaatacaactacattgccatggac
acagagtttccaggtgtagttgcgagaccgattggagagttcagaagcaatgctgactac
cagtaccagttactgcgatgtaatgtagacttgctaaagattatccagctgggccttacc
tttatgaatgaacagggtgaatatccaccgggaacttcaacatggcagttcaattttaag
tttaacctcacggaggacatgtatgcacaggactccatcgagctcttgacaacatcaggc
atccagttcaagaagcatgaggaggaggggatcgagacattgtacttggctgaactgctc
atgacctcaggagtggtgctctgtgagggcgtcaagtggctttctttccacagtggctat
gactttggctatctgatcaagattctgtccaactctaacctgcccgaagaggaagtggac
ttctttgagatccttcgcctgttcttccccatcatatatgatgtcaagtacctcatgaag
agctgcaaaaacctcaagggtgggctacaggaagtggcagaacagctggagctggagagg
attggcccccagcaccaagctggctcagactcactactgacaggcatggcattcttcaag
atgagagagatgttctttgaggatcatatcgacgatgcaaagtactgtggtcacttgtac
gggctgggttcaggctctgcatacgtccagaacggcacagggaacgcctacgaggaggaa
gccaataaacagctgtcatga
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