Salmo salar (Atlantic salmon): 100380660
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Entry
100380660 CDS
T04363
Symbol
frem1
Name
(RefSeq) FRAS1 related extracellular matrix 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100380660 (frem1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
100380660
NCBI-ProteinID:
XP_014011276
UniProt:
A0A1S3N785
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Position
ssa18:49667071..49696765
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AA seq
2201 aa
AA seq
DB search
MGLQRGALRWALPWLLLLVVAGGSHGSLVKTNLGLRVKRGQSAYLQEGDLQFHIPRVKDA
CKVEVVLNEPITQRVGTLTPQVFDCHYLADDVKYVHNGCPILKEDTVKLRLYRFTETETF
TEVFFLRVEVMEPDCNIIKLGPKSLVVPEFYGLSDTLDGNVVSFHYERMTSLECNIRVNT
HETHLPGHGQLVIGEPDQLEARGDEPESFIPLRQQLDNKARAMCKTEDCLKGLKLAKVTK
VPCDEFLVMGLRYQHIDPPSPDVDYIALRLDLTDTRSGSIYKSERAWIPVHIPGAVPNQP
PKPAFMSMFILEVDQFILTPLSTATLDAEDGETPKQLLVFNITKPPLEGFITHLSDHTRP
IFSFTWVDLNDMLIGYQPPNSSHTQRRNYEVEFEVHDFFFEKSAPIMVHMSVRTADTNAP
RVSWNMGLSLLEGQSRPITWDQLQIVDNDNFKAVRIITVDGLHHGRLTLRGGKGFMFTIA
DILAGAVRYHHDDSDTTKDFIIFRITDGRHQTRHKFPINILPKDDSPPFLITNTVLELSE
GHTALLRGSILQASDMDSSDDYILFNITRPPQAGELMKIPGPGLTGYPVSRFLQKDLFHS
VVYYRHLGNEVFDDSFEVVLSDFNDPPNLSEPQVIVVHINPVPDQPPKEVPGVTRCLVVK
ETEVVHLTKKQLHFIDLESPDSELTYTVTSPPFYSRSYGGHDAGRLFLVDSIAKFTKDPE
APVLRLFTQHAVNYMKVAYMPPILDIGPYPQHIQLVLSVTNQQGTTVAGICFNITVVPVD
NLAPEVHMKPLTVDEGGECWVGPDHLLLTDHDSTEESLRVELKREPQHGAVQLDGVPMKP
SQNFTVRDLKSLKVRYHHDSSETVGDAIELIATDGINAINFVLEVKVTLINDEVPVLMPG
LKPVLDCAEGQEVIITAEYIYATDADSDDNSLTYMIARQPYHGVVRKNAIVVDRFIQADI
VAGSITYEHTGAEIGLAPRHDTITFVISDGQAENVPSCCNDRGDTLKRGRTQVQESLPLY
DLKVTVFPVDSQMPSIATGDVFVVDEGGVGPITVAHLSASDVDTPLEELVISLVSPPQYG
YIENILPSPGFEKSNTGISIASFSYSDIMNGHVNYVQSRHQRIEPTADQFMLCVSDGKHT
SAHVHFYIIINPINDEVPEFLARNITVREGHMKELDPAVINAVDLDVPKNNLLFSVVQAP
QHGTIMGRTYGNDVPANGRPVNRHRDAEVVVQDFTMQDLRNGMSLMYMHDDSENMVDSFT
IHLTDGKHQLQRHVMVNVLPVNDEEPRVIRNNGLEVEAGEARLISSAILFAQDSDTTSQE
IVYMLESVPTQGLLQVKVGSDWLTQSAGMNCTQETVDMNLLRYLHTGPLGHTQDFFMFYL
LDGKNRSPAQHFHISLKDMEKGNIAVFVKPVKTSRGERVVLTTDVLLATDGTDKPEELFY
IVTVPPGNGHMEYIKHPGVAISTFSQMDIAANLVGYVHDNRATASLETLQFVVSNGKATR
NGTLEIFVETTDRVLPSLACNSGLRVPQDSSMAVTPDVLALSDPDTPPSDLLFFLAQPPQ
YGTLLRGGVPLAAGGNFTQWDLQELEVTYRHGGGPSHIDRFAFTASDTTNRSFLLEGRVQ
TEPVIFTIQIEPLDSSAPEVVQLQSLWKAEVLSDGRYGIYLSSRELRAQDGNTKDEDLTF
HIHRPPYFGYLENTIKGSFIQQRFTQRDLSKRTIVYIIDPATEALSDSLEFKVSDPLGNT
GPSHTLKVKWSRVELAVSEYQACEDQGTVSLDVLRKGNMAESSYITIKVREVTATAGKDF
TLSPSSLIQFDPGVSKRSWRIEITQDHLEEAEETFEVTLVSPEGTVVGSTSKALVKIKDS
GKGQCGSSRAPMGSSLGGKQVQSGPYPQHGSIHLETLPLAKGDQQMTWTRGDGMPQSVPA
AVPATPNMKLRAMANRKTIPPSSVHRNGTDTVFTYHGIMSVRLEDDKSPSRKGRKANIQV
TSRGQQQHAAAAPPVAPNLNPKPVPKTKSDSLLPRTMTEQPNKEASPSSGPKPCVPELMG
LLHFNQSSGGLLRCNGVSWKPWAPTDEMVSAQNCRKGWTYHSGYCYFLSTERKSSWSTAI
RACRESHQANLVSVFSKADMDWLWDFSGRKPFWIGLNDRESRGRWEWVGGEPITYTNWRK
SPARGKRKGTRRCVLVWRRAKWQIRDCKTGRGHLYMCYIKT
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgggtttacaaagaggggcactgcgatgggcacttccctggctgctgctgctagtcgtg
gctggagggtcacacggctccctggtgaagactaacctagggttgagggtgaagaggggc
cagtcggcctacctgcaggagggggacctgcagttccacatcccccgggtgaaggacgcc
tgcaaggtggaggtggtgctcaacgagccaattacgcagagggtggggacgctgacacct
caggtatttgactgccactacctggctgatgacgtaaagtatgttcacaatggctgcccg
atactaaaggaagatactgtcaagcttcgactctacaggttcacagagacagagaccttt
acggaggtcttcttcctgcgtgtggaggtcatggaacctgactgcaacatcatcaaacta
gggcccaagtccctggtggtgccagagttctacggcctgtctgacacgctggatggcaac
gtggtgtccttccactatgagaggatgaccagtcttgagtgtaacatccgtgtgaacacc
catgagacacacctcccgggtcatggtcagttggtcattggggagccagaccagctggag
gccagaggggacgagccggagagcttcattcctctccggcagcagctagataacaaggcc
agggccatgtgtaagactgaggactgcctgaagggcctgaagctggcaaaggttaccaaa
gtgccatgtgatgagttcctggtgatgggcctgaggtaccagcacatagacccaccgtct
ccagacgtggactacatcgccctccgactggacctcaccgacaccaggagcgggagcata
tacaagtcggagcgggcctggatacctgtccacatccctggcgcagttcccaaccagccg
cccaagccagccttcatgtccatgtttatcctggaagtggaccaattcatcctcacgccc
ctctccaccgccaccctggacgcagaggacggagagacccccaaacagctgcttgtgttc
aacatcaccaagccccccctagagggcttcatcacccacctgtcagaccacacgcgaccc
atcttctccttcacctgggtggacctcaatgacatgcttatcggctaccagccacccaac
tcctcccacacccagcgtaggaactatgaggtggagtttgaggtacatgacttcttcttt
gagaagagcgccccgatcatggtccacatgtcagttagaacagcagacaccaatgcaccc
agggtgtcatggaacatgggtcttagtcttcttgaaggtcagtctcgtccaatcacgtgg
gatcagctccagattgtggacaacgacaacttcaaggctgtacgcatcatcactgtcgac
ggcctccatcatggcaggctaacactgagaggtggcaagggtttcatgttcaccatcgcc
gacatcctcgcgggcgccgtgcgctaccatcacgacgacagcgacaccaccaaggacttc
atcatcttccgcatcaccgatgggcgccaccagacccggcacaagttccccatcaacatc
ctgcccaaggatgacagcccaccattcctcatcaccaacacagtgctggagctgtctgag
ggccatacggccctgctgagaggatccatactgcaggcctcagacatggactcaagcgac
gactacatcctgttcaacatcacccggccaccgcaagctggagagctcatgaagatccct
ggtcctggactcaccggttatcctgtcagccgtttcctgcagaaggacctgttccactct
gtagtctactaccgccatctagggaatgaggtgtttgatgactccttcgaagtggtgctc
tcggacttcaatgacccacccaatctttcagaacctcaggtcatagtggtgcacatcaac
cctgtgcctgaccagccacctaaagaggtccctggggtgactcggtgcctggtggtcaaa
gagacagaggtggtccacctgaccaagaagcagcttcacttcatcgatctggagtcccct
gacagcgagctcacatacactgttacctctccacccttctacagcaggtcttatgggggc
catgatgcagggaggctgttcctggttgacagcattgccaaattcaccaaggatcctgaa
gccccagtgttaaggttattcacacagcatgcagtcaactacatgaaagtggcctacatg
cctcccatcctggacattgggccttatccgcagcacatccagttggtgctctccgtcacc
aaccagcagggaaccacagtcgctggcatctgcttcaatattactgtggtgccagtggac
aacctggccccagaggtgcacatgaaacctctgacagtggacgagggtggggagtgctgg
gtgggtccagaccacctgctgctgacagaccatgactctacagaggagagcctgagagtg
gagctgaagagagagcctcagcacggagctgttcagctggatggcgttcccatgaaaccg
agccagaacttcactgttcgcgacctgaaaagcctaaaagttagatatcatcacgacagc
tcggaaacagtgggcgatgccattgaattaatcgctaccgatgggattaacgcaatcaac
tttgttctggaagttaaggtgacactgattaatgatgaggttccagttctcatgccaggt
ctgaaacctgttctggactgtgcagagggacaggaagtcatcatcaccgctgagtacatc
tatgccacagacgcagacagtgacgacaacagtctgacctacatgattgcccgccagcca
taccatggcgtggtgcgcaaaaacgccattgtggttgatcgcttcattcaggcagacatt
gtcgcagggagtatcacctacgaacacacaggagcggagattggactagcccctcgacac
gacacaatcacgtttgtgatatccgacggccaggcggagaacgttccgtcatgctgtaat
gaccgaggggacacattgaaaagaggcaggacacaagtccaggagagcctgcctctgtat
gatctgaaggtcaccgtgttccctgtggacagtcagatgccttctattgcaacaggagat
gtgtttgtggtggatgaggggggtgtgggccctataaccgtagcccacctcagtgcctcg
gatgtggacactcctctggaggagctggtgatcagcctggtctctcctccccagtatggc
tacatagagaatatcctgcccagtcctggatttgagaaaagcaacacaggcatcagcatc
gcctccttctcttacagtgacatcatgaacggacatgtgaactacgtccagtccagacac
cagaggatcgagccaaccgctgaccagttcatgctctgtgtctctgatgggaaacacacc
tctgcccacgtccacttctacatcatcatcaaccccatcaatgacgaggtcccggagttt
ctcgccagaaatatcacggtgcgagagggccatatgaaggagctggaccctgctgttata
aacgcggtggatctggacgtccctaagaacaacctgctgttcagcgtggtccaggccccc
cagcatggcaccatcatgggccgaacgtatggcaacgacgtgcccgccaatggaagaccc
gtcaacaggcacagggatgcagaggtggtggtccaggacttcaccatgcaggatttgagg
aatggtatgtctctgatgtacatgcacgatgactctgagaacatggtggacagcttcacc
atccatctgaccgatgggaaacaccagctccagaggcacgtgatggtcaacgtactccct
gtcaatgatgaggagcctcgagtcataaggaacaatggactggaggtggaggcaggcgag
gctaggctgatctccagtgctattctctttgctcaggacagcgacactacctctcaggag
atagtctacatgttggagagcgttcccactcagggactgctacaggttaaggtaggctct
gactggctgacccagtctgcggggatgaactgcacccaggagacagtggacatgaacctg
ctgcgctacctccataccgggccactgggacacacacaggatttctttatgttctacctg
ctggacgggaagaaccgctcccccgcgcagcacttccacatctccctcaaggacatggag
aaaggaaacattgccgtttttgtgaagccggtgaagaccagccgcggtgagcgcgtggtt
ctgaccacggatgtcctgctggcgacggacggtacagacaaacccgaggagctgttctac
atcgttacggtcccccccggcaacggccacatggagtacatcaaacaccctggggtggcc
atcagcaccttcagccagatggacatcgctgccaacctggtgggctacgtccacgacaac
agggccaccgcgtcgctggagacactacagttcgtcgtcagcaacggcaaggccacccgt
aacggcaccttggagatcttcgttgagaccaccgaccgcgtgctgccatcactggcctgt
aacagcggcttgagagtcccccaggactcctccatggcggtgacgcctgacgtcctcgcc
ttgtccgaccccgacaccccacccagtgacctgctcttcttcctggcccagcctccgcag
tacggcaccttgctccggggcggtgtcccactcgctgctgggggtaacttcacccagtgg
gatctgcaggagctggaggtgacctacaggcacgggggcggcccgtcgcatatcgaccgc
tttgccttcacggcctcagacactaccaacaggagtttcctgctggaggggagggtacag
acggaacctgttatctttaccattcagattgagcctttggacagctcggctcctgaggtt
gtgcagctgcagtctctgtggaaggcggaagtcctgtctgacggtcgctatgggatctac
ctctcatcccgggagctgagagcgcaggacggcaacaccaaggacgaagacctcaccttc
cacatccacagaccaccatactttggctacctggagaatactattaaaggcagctttatc
cagcagcgtttcactcagagggacctgagcaaaaggactatcgtgtatatcatagaccca
gcgacagaagccctgtcggacagcctggagttcaaagtgtccgaccctctggggaacact
gggccctcccacacactgaaagtgaagtggtctcgtgtggagctggctgtgtctgagtac
caggcatgtgaggaccagggcacggtctcactggacgtcctacggaaaggcaacatggcc
gagtcctcgtacatcaccatcaaggtgagagaggtcacagcgactgctggaaaggatttc
actctgagcccatccagcctaatccagtttgatcctggcgtatccaaaaggagctggcgt
attgagattacccaagatcacctggaggaggcagaggagacatttgaagtgacactggtg
tcccctgagggaactgtagtaggcagcacctccaaagctctggttaaaatcaaggactct
gggaaaggacagtgtggatccagtcgggcccctatgggctccagtctgggggggaagcag
gttcagtcagggccctacccccaacatggctccattcatttggagacactaccccttgcc
aagggagaccagcagatgacctggacccggggcgatggtatgccccagtctgtgcccgct
gctgtgcccgccacgcccaatatgaaactcagagccatggccaatagaaagacaattcca
ccatcgtcagtccatcgtaatggaacagacactgtgttcacgtaccacgggatcatgtcc
gtgcgcctggaggatgacaagtctccgtctaggaagggaaggaaggctaatattcaggtg
accagcagagggcagcagcagcatgcagcagcagcaccaccagtggctcccaacctcaac
cctaaacctgtccctaagacgaagagtgacagcttgctcccacgaacaatgactgagcag
cctaataaggaggcttcacctagctctggccctaaaccctgtgtcccagagctgatgggg
ctcctacactttaaccagagctcaggcgggctcctccgctgcaacggggtctcctggaag
ccctgggctcccactgatgagatggtcagtgctcagaattgtcgtaagggctggacctat
cacagcggctactgctacttcctgagcaccgagcgcaagtcgtcgtggagcaccgccatc
agggcatgtagggagagtcaccaagccaatctggtgagcgttttttccaaggctgacatg
gactggctgtgggacttcagtggaaggaagccattctggataggcctaaacgacagggag
agccgaggacgctgggagtgggtgggtggagaacccatcacctacaccaactggaggaag
agtccagccagaggcaagaggaaggggaccaggaggtgtgttctggtgtggaggagggcc
aagtggcagatcagagactgtaagacgggcaggggtcatctctacatgtgttacatcaag
acgtga
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