Salmo salar (Atlantic salmon): 106560436
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Entry
106560436 CDS
T04363
Name
(RefSeq) protein ERGIC-53-like
KO
K10080
lectin, mannose-binding 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106560436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106560436
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sasa04091
]
106560436
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
106560436
Lectins [BR:
sasa04091
]
L-type lectins
106560436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
GCN5L1
Laminin_I
DUF948
DUF5063
COG3_N
RebB
PilJ
Fungal_TACC
Motif
Other DBs
NCBI-GeneID:
106560436
NCBI-ProteinID:
XP_013978808
UniProt:
A0A1S3KJ97
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All DBs
Position
ssa01:complement(104233061..104260991)
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AA seq
509 aa
AA seq
DB search
MAVTIGRCLAVDACLLILTLTCHHSNADNVVAGASTEEAPHRRFEYKYSFKGPHLSQTDG
IIPFWVHIGNAIPSADQVRITPSLRSQKGSVWTKNTVNFDHWEVEVTFRVSGRGKMGADG
LAIWFTTAQGLDGPVYGAADNWNGIGIFFDSFDNDGKKNNPAVLVVGNNGKLVYDHPNDG
TTQALGTCLRDFRNKPYPVRAKITYYKKTLTVLINNGFTPDKDDYEFCTKVDNMIIPQEG
YFGISAATGGLADDHDVLSFLTFRLTEPGQELPAPEAEMPKEEQDKYQEEFENFQQELDK
KKDDYQKEHPEVQREPIEEMYESVNDREIRQVFEGQNQIHQEIKQLHRQLAMILDEQSRY
VSVVTDEISKRHGELVGQAPSQEMGAVVATQQEILRNLNELRNSFHESLKQIDATQHQAN
PVSMGTYETVQHFNEIQEHLHVVKRNIEHLITRNGSPSENQGEKCPDPPKMPSCLGTIHF
LVFVVIQSVLFLSYIMYKSQQEAAAKKFF
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaccattggaaggtgtctggctgttgatgcttgtttattaatattaacttta
acatgtcatcacagtaatgccgataatgttgttgccggtgcatcgactgaagaagcccca
caccgccgatttgaatacaagtacagtttcaagggaccgcacctgtctcaaaccgacggg
attattcctttttgggtgcacattggaaatgccatccccagtgccgaccaggtccgtatc
accccctctctcaggagtcagaagggctcagtctggaccaaaaacacggtcaactttgac
cactgggaggttgaggtgacctttcgtgtgtctggacgggggaagatgggagctgacggc
ctggcgatatggttcaccactgcacaaggcctagatggtcctgtctatggagccgctgac
aactggaatggcatcggcatcttcttcgattcctttgacaacgatgggaagaaaaataac
cctgctgtgctggtggtgggaaacaatggcaaacttgtttatgatcacccaaatgatggt
acgactcaagccctgggaacatgcttaagagactttcgtaacaaaccctatcctgtcaga
gccaaaataacatactacaagaagacactaacggtgctgatcaacaatggtttcacacca
gataaggatgactatgagttctgtaccaaggtggacaacatgatcattcctcaggagggc
tactttggcatctcagctgccacgggaggtctagcagatgaccatgatgtcctgtccttc
ttgacgttcagactaacagaacctggccaagaactgcctgcacctgaagcagagatgccc
aaggaggagcaggacaagtaccaggaggaatttgagaactttcagcaggagctagacaaa
aagaaagatgactatcagaaggagcatccggaagtccagagagaacccatcgaggaaatg
tacgagagtgtcaacgacagggagatccgccaggtgtttgagggtcagaaccagatccac
caggagatcaaacagcttcaccgtcagctggccatgatcctcgacgaacagagccgctat
gtctctgtggttacagacgagatatccaaacgccatggggagttggtgggacaggctcct
agtcaagaaatgggtgcagtggtcgcaacacaacaggagatactgagaaacctgaacgag
ttgagaaactctttccatgagtctctgaagcagatcgacgccactcagcaccaagccaac
ccagtgagcatggggacatatgagacggtgcaacacttcaacgaaatccaggaacatcta
cacgtggtcaagaggaacatcgaacacctcatcacacgcaatgggagccccagtgaaaat
cagggagagaaatgccctgaccctcctaaaatgccttcctgtctgggtactattcacttc
ttggtctttgtggtcatccaatcagtcctgttcttgagctacatcatgtacaaaagtcaa
caagaagcagcagcaaagaaattcttttga
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