Salmo salar (Atlantic salmon): 106561060
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Entry
106561060 CDS
T04363
Name
(RefSeq) transcription factor SOX-6-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106561060
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106561060
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Activator_LAG-3
Motif
Other DBs
NCBI-GeneID:
106561060
NCBI-ProteinID:
XP_013980141
UniProt:
A0A1S3KNA1
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Position
ssa10:66608880..66754413
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AA seq
750 aa
AA seq
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MMSSKRATPPFPPATEEEEAIGQDSVGWANEDRESHGQPVTPPLHGKPLPEEHQPNRDSQ
PESDWESIGPIQTDNASSKGCYSYRNNTISPPKPEECSQDCVELLGGSAFRTPERRKGSL
ADVVDTLKQKKLVELTKTEQDESTCVETLLSRDWKDRRDRLNASELLGEVKGTPESLEEK
ERQLSTMIGQLISLREQLLAAHDEQKKMAVSQMEKQRQQMELARQQQDQITRQQQQLLQQ
QHKINVLQQQIQVQGHMPPLMIPVFPHDQRSMAAAAAQQGFLFPPNMSYKPGDNYPMQFI
PSTMAAAAASGLSPLHQQLYAAQLASMQISPGAKMASLPQPQNSSGPLSPSALKSKKRAS
SPVTHIKEEGSTQPLNLSARPKPGEPHHSPSSPSHSLYPGNKSRPISMGKRRIPSPLSNM
GRGSLDILSSLNSTPLFGDQDAVMNAIQEARKMREQIQREQLHHQQQSLEAKLTALSGMS
FSNGSKERMHFESLSQHLGNLGEDGKMGHRVIDLTRHEDVDGVASTTEARVFRETRGRNS
TEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILGSRWKSMTNQEKQPYYEEQAH
LSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFSVGPQPQIPIS
NSAGGLYPAAIATATPSPHLTSDCSSASASPEPAIPVTQSTFGVVTPKPVAMVTGDHPVS
GEDEIDMYEDFEDKSDYNSDRETREPVGAN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccaagcgagcaacacctccgtttcccccggcgacagaggaagaggaagcg
ataggtcaggacagtgtgggctgggccaatgaggacagagaaagccatggccagccagtt
acgccccctctgcacggcaaacccctcccagaggagcaccagccaaacagagacagccag
cctgagtcggactgggagagtataggccctattcagacagacaatgctagtagcaagggc
tgttactcctaccggaataacactatatctccaccaaagcctgaggagtgttcccaggat
tgtgtcgagctgctaggcggatccgccttcagaacaccggagcgccgcaaaggaagcctg
gccgacgtggtggacacactgaaacagaagaaactagtagagctgacaaagacagaacag
gatgagtctacctgtgtggagacacttctgtccagggactggaaagacaggagggacaga
ctgaatgccagcgagctcctaggagaggtcaaaggtaccccagagagtttggaggagaag
gagcgtcagctttcgaccatgattggccagctcatcagcctgcgggagcagctcctggcg
gcccacgacgagcagaagaagatggccgtctcacagatggagaagcagaggcagcaaatg
gagctggcccgtcagcagcaggaccagattacgaggcagcagcagcagctcctgcagcag
cagcataagatcaacgttctccagcagcagatacaggtgcagggtcacatgcctcctctg
atgatcccagtgtttcctcacgaccagcgatctatggcggccgctgccgcacagcagggc
ttcctcttcccaccgaacatgtcctacaagccaggtgataactacccgatgcagttcatt
ccatccacaatggcagctgcagccgcgtcaggactgagcccgctccatcagcagctgtac
gccgcccagctggccagcatgcagatctcgcccggagccaaaatggcctccctgccgcag
cctcaaaactcctcaggccccctctcgccctctgccttgaagagtaagaagagagcatcg
agtcctgtcactcacattaaggaggaaggatcgacacagcccctgaatctctcagcccga
cccaagcctggcgagccccaccactccccatcctcgccgtcacacagcctgtaccctggc
aacaagagcaggcccatcagcatggggaagaggcgcatccccagccctctctccaacatg
ggcaggggctcactggacatcctgtctagcctgaactccacgccactgtttggggaccag
gatgcggtgatgaacgccatccaggaggcgaggaagatgagggagcagatccagagggaa
cagcttcatcaccagcagcaaagccttgaggccaagctcacggccctgagcggcatgagt
ttcagcaatggcagcaaggagcggatgcactttgagagtttgagtcagcacctgggcaac
ctgggagaggatggaaagatgggccacagggtcattgacctcaccagacatgaggatgtt
gatggtgtcgccagcactacggaagcccgggtcttcagggagaccaggggcaggaacagt
actgagccccacatcaagaggcccatgaatgccttcatggtgtgggccaaggacgagagg
aggaagatcctgcagaccttccccgacatgcacaattccaacatcagcaagatcctgggc
tctcgctggaagtccatgaccaaccaggagaagcagccatactacgaggaacaggcccat
ctcagtaagatccacctggagaagtaccccaactacaagtacaagccccggcccaagagg
acctgcatcatcgacggcaagaagctacgcattggcgagtacaagcagatgatgcgctcg
cggcggcaggaaatgaggcagttcttcagtgtggggccacagcctcagatccccatcagc
aacagtgccggcggcctctacccggctgccatagcgacagccacaccctcaccgcacctg
acgtcggactgctccagcgcctcggccagccccgagcccgccatccccgtcacccagagc
acgttcggcgtggtcacgcccaaaccggtcgccatggtgaccggcgaccacccggtcagc
ggagaggacgagatagacatgtatgaagactttgaggacaaatcggactacaacagtgac
cgtgagacacgggagcctgtcggcgccaactga
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