Salmo salar (Atlantic salmon): 106561475
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Entry
106561475 CDS
T04363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106561475
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106561475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
YscO-like
Y1_Tnp
MAP65_ASE1
DASH_Dad3
LMBR1
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
106561475
NCBI-ProteinID:
XP_013980946
UniProt:
A0A1S3KQF8
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Position
ssa10:99593815..99605321
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AA seq
551 aa
AA seq
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MAQKGVLLDQGQFCCSVCLDLLKEPVTIPCGHNYCRSCIEGCWDQDVLKGVYSCPQCRET
FIPRPNQRKNNMLADMVEELKKTRLQAAPPPARCYAGPGDVVCDFCTGTRKQKALMSCLV
CLASYCETHLQSHYEFTALKKHKLVKATAQLQEKICSHHDKLLEVYCCTDQQCICMLCTM
DEHKGHDTVSAAAERNEKQRQLGMSQQKVQQRFQEREKKLKELQQAVESLKRSAQAAVED
SDQIFTELIRSIERRSSEVKEMIRASEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSVSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVEVVLPPEPKTREQLLQYSCQLTLDPNAAHTRLSLSDGNRKVTCTDQDQPYPDHP
DRFTNTYQVLCREGLSGRCYWEVEWSGGVYTAVSYKDISRTGSYSGFGDNNKSWSLLCYS
DGYWFRHNNVVTKVYGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYSGF
CLTGTAELVKL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaagggagttctgctggaccagggccagttctgttgttctgtctgtctggat
ctactgaaggaaccagtcaccatcccctgtggacacaattactgtaggagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagact
ttcattccaaggcctaatcagaggaaaaataacatgttggctgatatggtggaggaactg
aagaagacaagactccaggctgctccccctcctgctcggtgctatgctggacctggagat
gtggtgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtttggtg
tgtctggcctcttactgtgagactcacctccaatctcactatgaatttactgctttgaag
aagcacaagctggtcaaagccactgcacaactacaggagaagatctgttctcatcatgac
aaactgctagaggtttactgttgtaccgatcagcagtgtatctgtatgctgtgtacaatg
gatgagcataaaggccatgatacagtgtcagctgcagcagagaggaatgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaagaagctg
aaggagctgcaacaggctgtggagtctctcaagcgctctgcacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctctattgagagaaggagctccgaggtgaag
gagatgatcagagcatcagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagcttaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtgtcagtgtatct
tcagacttacccagtatcgtggtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggaggttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacgcagcacacacacgcctctctctg
tctgatgggaacagaaaggtgacctgtacagaccaagaccaaccatatcctgaccatcca
gacagattcaccaacacctaccaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggtggtgtttatacagcagtctcatataaagacatcagccga
acagggtcatatagtggatttggagacaataacaagtcctggagtttactgtgctacagt
gatggttattggttcagacacaataatgttgtgactaaagtatatggacctcagtcctcc
agagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgac
acaatgaccctcctccacagagtccagaccacattcactcagcccctctattctgggttt
tgtcttactggtactgctgagctggtgaaactgtag
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