Salmo salar (Atlantic salmon): 106561501
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Entry
106561501 CDS
T04363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106561501
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106561501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-RING_6
zf-C3HC4_3
U-box
zf-RING_2
Fib_alpha
YscO-like
Y1_Tnp
DASH_Dad3
MAP65_ASE1
Exonuc_VII_L
Spc24
DUF445
Motif
Other DBs
NCBI-GeneID:
106561501
NCBI-ProteinID:
XP_013981020
UniProt:
A0A1S3KQZ5
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Position
ssa10:complement(101379753..101447205)
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AA seq
549 aa
AA seq
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MAQQGVLLDQDQFCCSVCLDLLKEPVTTACGHNYCRICIEDCWDQDVLKGVYSCPQCRET
FTPRPNLRKNNMLADMVVELKKTGLQAAPLPALCYAGPGDVACDFCTGTRKQKALMSCLA
CLASYCEPHLQPHYEFPGFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICLMCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQERKKELKELQQAVESLKRSAQAAVED
SDQMFTELIRSIERRSSEVKELIRAQEKAQVSQAEELLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGELTKIS
TTVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSKGNRTVTCTGLVQPYPNHPDRF
TNYWQVLCRERLSGRCYWEVKFCGELVYTAVSYKDISRTESDSLFGDNNKSWSLLYYRGD
YCFRHNNVVTKVPGPQSSRVGVYLDHKAGTLSFYSVSDTLTLLHRVQTTFTQPLYPGFYV
NGTAELVKL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcctgtggacacaattactgtagaatctgtattgag
gactgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgatatggtggtggaactg
aagaagacaggactccaggctgctccccttcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggca
tgtctggcctcttactgtgaacctcacctccaacctcactatgaatttcctggtttcaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgatgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgctgcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagaaagaaggagctg
aaggagctccaacaggctgtggagtctctcaagcgctctgcacaggcagcagtggaggac
agtgatcagatgtttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaagaactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcatatccatttcctccagagttatcagtctctctccagtatcagtgtatca
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaattgaccaagatttcc
actacagtggatgttgtactgcctccagagcccaagaccagagaacagttgttacaatat
tcctgtcagctcacactggacccaaacacagcacacacacacctctctctgtctaaaggg
aacagaacggtgacctgtacaggcctagtccaaccatatcctaaccatcctgacagattc
accaactactggcaggttctgtgtagagagcgtctgtctggacgctgttactgggaggtg
aagttttgtggggagttggtttatacagcagtctcatataaagacatcagcagaacagag
tcagatagtttatttggagacaataacaagtcctggagtttactgtactatagaggtgat
tattgtttcagacacaacaatgttgtgactaaagtaccaggccctcagtcctccagagta
ggagtgtacctggatcacaaagcaggtactctgtccttctacagtgtctctgacacattg
accctcctccacagagtccagacaacattcactcagcccctctatcctgggttttatgtc
aatggtactgctgagctggttaaactgtag
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