Salmo salar (Atlantic salmon): 106562100
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Entry
106562100 CDS
T04363
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106562100
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106562100
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106562100
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106562100
Ubiquitin system [BR:
sasa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106562100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
106562100
NCBI-ProteinID:
XP_013982155
UniProt:
A0A1S3KU78
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All DBs
Position
ssa11:complement(18617690..18638713)
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AA seq
1395 aa
AA seq
DB search
MEMVPSEENQLVLKEGMFWSCRHSIFDEMKKRFSQVENAAEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTTLSKLFEDVAHKAGYVNGTFDLAWRKTGDMGPLDPSSEMSLTESGFEPGK
RNFLQLTDKDGEQPQIASDESGTAGSSGLDDRQERFIGPLPRDCTVGCSSDYSSPSYSYS
SILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQ
RLFLLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQQQFS
PLTADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAF
VQPETLDGANQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMS
FPEELDMGPFMDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSADDGVDEGICLDSAS
STERVLKPKVPSLNTSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKI
TQEDIRKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLDCDDFPEHIKHLVQ
REKESEEQEKRQREIERNTCKIKLFCMHPVKMMAMMENKLEVHKDKTLREATEMAYKLME
LDGVVPLDCCRLVKYDEFHEYLERSYEGEDDTPMGLLLGGVKSSYMFDLLLETRRPEQVF
QPYKPGEVMVKVHVVDLKTDTVAPPVSIRAYLNQSITEFKQLIAQATELSAETMRVVLER
CYNDLRLLYVPNKTLKAEGFFRSNKVFVESSESPDHQVTFTDSLLWKLLDRHGNTIRLFV
SLPVQSPGTNRTICQKVGGDPEECSEGSKGNRNSVETILEESTEKLKNLSLQQQQGSCTS
DSQKSSDTSDFEHIESPSPSQELDSSVSAVVAVDNRELENRIRAAGGGTYSDPETQFPGE
ERSDSEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKANEG
KKETWDTAEEDSGTDSEYDENGKSKAESYYLYFRAEPYAQEDGSGEGGQKCVLVHVDKRI
TLSAFKQNLEPFVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKK
GEYRVKVYQLLVNDAEPCKFLVDTVFAKGMTVKQSKEELMPQLKDQCKLDLNIDKFRLRK
KTWKNPGTVFLDYHVYEEDINISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWNPAQMKLE
PFQEVVLESSSVEELKEKLSEISGVPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVST
LNVWPLYICDDGAVVFYRDSTEEPMEQSEDERNELMKRESSRLLKTGHRVSYSPRKEKAL
KIYLDGGPVKDPGQD
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaatcagctcgtactcaaagagggtatgttttggagt
tgcaggcatagtattttcgatgagatgaagaagaggttttctcaggtagagaatgcggcg
gaggagcccagagtgctgtgcatagtccaggacactaccaatgctaagacagtcaatgaa
aggctcaccctcaacttgccagcctccaccaccctctccaaactcttcgaggatgtggcc
cacaaggcgggctatgtgaacggcacctttgacctggcatggcgcaagactggggacatg
gggccgctggaccccagcagtgagatgtccctcactgagtccgggttcgagcccgggaag
aggaacttcctccaactcacagacaaggatggagaacagcctcagattgcatcggatgag
tcggggacagcgggcagcagtggtctggatgaccgccaggagcgcttcatcggccccctg
cccagagactgcacggtgggctgcagcagtgactacagcagccccagctactcctactcc
tccatcctcaacaagtctgacacaggatatgtgggtttggttaaccaggccatgacctgc
tatttgaacagccttctacaaacactgtttatgaccccagagttcagaaatgcgctgtac
aactgggagtttgaggagtcggaggaagacccagtcaccagcatcccttaccagctacag
aggctgtttttgctgctgcagacgagtaagaagagggccatcgagaccaccgatgtgacc
cgcagcttcggctgggacagcagcgaagcctggcagcagcatgacgtccaggagctgtgt
agggtcatgtttgatgccctggagcagaaatggaagcagacagagcagcagcagttttct
ccacttacggctgacctgattaaccagctttaccaggggaagctgaaggactatgtgcgc
tgtctggagtgtggctatgagagctggaggatcgacacctacctggacatccctctggtc
atcagaccatttggggccagccaggcttatggcagcgtggaggaggctctgcaggccttc
gtccagccagagactctggacggggccaaccagtacttctgtgagcgctgcaagaaaaaa
tgtgatgcccgtaaggggctgaggtttctgcactttccctacctgctgactctgcagctg
aagcgttttgactttgactacaccactatgcaccgcatcaaactcaacgaccgcatgtcc
tttcctgaggagctggacatgggtcctttcatggacgtggaggacgagaaatctcctcaa
acggagagctgcactgacagcggggcagagaatgaaggcagttgccacagcgaccagatg
agcaacgacttctcggcggacgacggtgtggatgagggcatctgcctggacagcgccagc
agtactgagagggtcctgaagccaaaggtacccagcctcaacactagttcattgaccttt
gagctgttctcggtcatggtgcattcgggcagcgctgcaggtggccactactatgcctgc
attaagtccttcagcgatggccagtggtacagtttcaacgaccagcacgtcagcaagatc
acccaggaagacatcaggaaaacgtatggagggtcctcagggagcagaggctattactcc
agtgcctttgcaagctctacgaatgcgtatatgctgatttataggttgaaagacccctca
aggaatgcaaagtatctggattgtgatgacttccctgagcacataaagcatctggtccag
agggagaaggagtctgaggagcaggagaaaagacagagggagatcgagcgcaatacctgc
aagatcaagctgttctgcatgcatccggtgaagatgatggctatgatggagaacaagctg
gaagtgcacaaggacaagacgctcagagaggcaacagagatggcctacaagctcatggaa
ctggatggggtggtcccgctggactgctgtcgccttgtcaagtacgatgagttccatgag
tacctggagcgctcgtacgagggcgaggacgacacccccatggggctactgctgggcggg
gtcaagtcctcctacatgtttgacctgctgctggagacccgcagaccagagcaagtcttc
cagccatacaaacctggagaggtgatggtaaaggttcacgtggtggatctgaagactgac
actgtcgcccctccagtcagcatcagggcctatctaaaccagtcaatcactgagttcaag
cagctcattgcacaggccacagagctctcagctgaaaccatgcgtgttgtcctggagcgc
tgctataatgaccttcggcttctctacgtgcccaacaagacactgaaagcagagggtttc
ttcaggagcaacaaggtttttgtggaaagctctgaatccccagatcaccaggtcactttc
actgattccctcttgtggaaactgctggatcgccatgggaacacaatccgcctgtttgtc
tcgctccctgtgcaatcccccggcaccaacagaactatttgccaaaaagtgggcggtgac
cctgaggagtgctctgaggggtcaaagggcaacaggaattctgtagagaccatcctggag
gagagcacagagaagctgaagaacctgtccctccagcagcagcagggctcctgcaccagt
gacagccagaagagctcagacaccagcgacttcgagcacatcgagtccccctcaccctct
caggaactagactcctccgtatccgctgtcgttgcagtcgacaaccgagagctggagaac
cggatccgggcggccggcggggggacctactctgacccggaaacccagttccctggggag
gagcgctcggactctgaggtgaacaacgaccgcagcacgagttcagttgacagtgacatc
ctgagctccagccacagcagtgacacgctgtgcaacgctgacagtggccccattcagctg
gccaatggcctggactcacacagcatcaccagcagccgccgctccaaggccaacgagggt
aagaaagagacgtgggacacagccgaggaggacagtggcacggacagcgagtatgatgag
aatgggaagagcaaggcggaatcctattacctctacttcagagcagaaccatatgcacag
gaggacggctctggggaaggaggccagaaatgtgtactggtccacgtggataagaggata
actctgtcagcgttcaaacagaacctggagcctttcgtgggggtcacctctacccagttc
aaggtgttccgcgtctacgccaacaaccaggagtttgagagtgtacggctcaacgagacc
ctctcttccttctctgacgacaacaagataaccattcgattaggcagagcactgaagaag
ggcgagtatcgggtgaaagtgtaccagctactagtgaatgatgcagagccctgtaagttc
ctcgtggacacagtgtttgctaagggcatgactgtgaaacagtccaaagaggagctaatg
cctcagctgaaagaccaatgcaagctggatctcaacatcgacaagttccgtctcaggaag
aagacgtggaagaacccagggacagtgtttctggactaccacgtctacgaggaggacatc
aacatctccagtaactgggaggtctttctggaggttctagatggaccggagaagatgaag
tccatgtcccagctggctgtgctgacccgccgctggaaccccgcccagatgaagctggag
cccttccaggaagtggttctggagagcagcagtgtggaggaactcaaggaaaagctcagt
gaaataagtggtgttcctcttgaaaacctggagtttgcgaaggggcgcggaacatttcct
tgtgatatctctgtactggagatccatcaggatctggactggaaccctaaagtgtccact
ctgaatgtgtggcctctgtacatctgtgatgatggcgctgtggtcttctacagggacagc
acagaggagcctatggaacagtctgaagacgaacgcaatgagctgatgaagagggagagc
agccgcctgctgaagactggccaccgggtcagttactcacctcgtaaggagaaggccctt
aagatctacctggatgggggcccggtcaaggacccggggcaggactga
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integrated database retrieval system
