Salmo salar (Atlantic salmon): 106562322
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Entry
106562322 CDS
T04363
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
sasa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106562322
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106562322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106562322
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106562322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
106562322
NCBI-ProteinID:
XP_013982601
UniProt:
A0A1S3KV66
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Position
ssa11:complement(24648917..24652953)
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AA seq
470 aa
AA seq
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MAAKAADGGGTTDLIDIYDEKFSQNNGEDGDFATTAEASDLYDDVLTGSVSQERKFSEDA
IPLSKDQPTKEESKPAIMYTYSGVWNKRLAVYVGNFSWWTSDKDLINVARTLGVKDIVEI
KFAENRANGQSRGYAEVVVATEESLQRLLETLPNCNVNGEKVDCRFATRQNLAVFEAQAN
KRVPQRSNSKESSDTGDKNASVSPPVLNQNHSTVPHTIHPQHIHNKPPPLSVPYFRLPPP
LFPHLPPHIPPPPMPHLFPPPPLRLPSHPPPSLHLNPAFFPPAQHDNYSQQHNTSYNRHN
SRDSEAPTPQMPEGEFDELMNRNRAIASSAITKAVSGATAGDMPLAIETLLTAIAVIKQS
RVYGDERCRALVTSLKDCLFSIESKSYGSRKRHRSRDREHRSRDRERDRERERDRGRGRE
EREESYSQEWEAAGMSRRHRERSLSGERDGRDRERVRERDRHREHRERHR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaagcggccgatggtggtggtacaactgacctcatagacatctacgacgag
aagttcagtcaaaacaacggggaggatggagattttgcaacaacagcagaggcaagtgat
ctttacgatgatgtgctcactggctctgtgagccaggaaaggaaattctcagaagatgct
atccctctcagcaaggaccagccaacgaaagaggagagcaaaccagcaataatgtacact
tacagtggggtgtggaacaagagactggctgtatatgtgggcaacttctcctggtggacc
tctgacaaagaccttattaacgtggctcgcaccttgggtgtgaaggacattgtggagatc
aaatttgctgagaacagagctaatggccagtccagaggatacgctgaggtagtggtggcc
acagaagagtcattgcagaggttgctggagactttgccaaattgtaatgttaatggagaa
aaggtggactgccgctttgccacacgccagaatcttgccgtgtttgaagcccaggctaat
aaacgtgtcccccagcgctctaactcaaaggagtcgtcagatactggagacaaaaacgcc
tccgtctcccctcctgtgctcaaccagaaccactccactgtccctcacactatccacccc
caacacattcacaacaaacctccccctctgtcagtcccatactttaggctgcctcctcct
cttttccctcaccttcccccacacatccctcctccccccatgccccaccttttccctcca
ccacctctacgtctccccagccatcctcctccctccctgcatctcaaccctgccttcttt
cctccagcacaacacgacaactacagtcaacaacataacacatcgtacaaccggcacaac
agcagggacagtgaagcgcccacaccccaaatgccagagggagagtttgatgagctgatg
aacagaaaccgagcaatcgccagcagcgccatcaccaaggctgtgtctggagctactgcc
ggagacatgcccctggccattgagacccttttgactgccattgctgtcatcaagcagtca
agagtgtatggagacgagcgctgtcgagcgctggtcacctctctgaaagactgcctcttc
tccatcgagagcaagtcttatggctccaggaaaagacaccgctcccgtgacagagaacac
cgttcccgagatagagagcgggacagggaaagagaacgggacagaggcagaggaagggaa
gaaagggaagagtcctacagccaggaatgggaggctgcaggaatgtcccgccggcaccga
gaacgctccctaagtggggagagagatgggagagaccgggagcgtgttcgggaacgagat
agacatagggagcaccgcgagcggcaccgctag
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