Salmo salar (Atlantic salmon): 106562362
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Entry
106562362 CDS
T04363
Name
(RefSeq) tripartite motif-containing protein 66-like
KO
K12032
tripartite motif-containing protein 66
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106562362
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106562362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
Pertussis_S1
DUF1281
Motif
Other DBs
NCBI-GeneID:
106562362
NCBI-ProteinID:
XP_013982673
UniProt:
A0A1S3KVP0
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Position
ssa11:complement(25691144..25713067)
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AA seq
1319 aa
AA seq
DB search
MEKRCSECPEPRLAQSLCTFCNKWLCYQCTDMHQHQRATPQCSDLHQHQKPTTQCVDLHQ
RDQMAPSSLPPPEPGPGSCGRPLLMCHSHRQEPLELFCESCDLMCCSSCHLSAHKNHRLV
HIGKALQDQQWQFESLMAQVEERRSAVESTAKQIEDRLHGVKITQRKAENQIKMAKMIMM
NELNKRANLLIEQLEKISEDFQRRLEDQLQGEIEMCSQLDHVQNFISWATAHHLKNPLLF
SRELISLQMQRLLEPPLHSDAWLPVKIKFNWDASYWTKQISTLGQLTAEGGNHSYSEGVA
FPSILRPQPITCLSLPSVCHGGREQSCAFQACCQPQMCCLHCIPPQPAVQLDKTQREPNP
YSARCAQSTLSSPSLALHQSQLLRCWGPDSPPGPPAVVPSSMQRPQQPAHLPAADPGLLS
SSSNSGGLGLQTLVTALYQPQIQPLPDTHAQPATDGAREGQSQQASREREQTPGQTAVDR
EVLTEQIQEGSREKTHVQTAVDREVLTEQIQEGSREKTHVQTGVDREVLTDGIQQEQQQQ
QQQQLLAPLVAELTVEQQEEEQQEARTTQPSRDCRDGRRSTSLEMSVTTHGFSVDAQSSR
PSSLCGRKSRSQSIPPELAGPSNSPSTERPLGATHSLATATAAVERGRMADQHGFMDLRR
RRLSSDGVIRSVASLERSLATPPSRGQPSLCLSPLTIYKTEPDYVYAYDETGHDVKGKCR
IPRKTPDNSDREVQKEPGSSSSKVPVVCLERLKILVSRIPPQGRRQSDPLPGTATERTGP
VPQRGWKDKMNEGISKEAKVATVSPSLDKQYSERHTINQSLPPSVINDWPEHGGHSPHKE
LTLQVPATDLVSPPPFAAPDLDSDSDPRSISEIVSDPELDSDPQPESDPQQESDPQPESD
PQAESASEADLESVADEESPATESEPSVESEPSVESEPSVESEPRGESEGSEESENGLES
ENGENLDADAESEADIESDLQPDPGSDPRFPSETRPGLDSDLESDCAQPPESQGSAESGP
DLESEPDSAPDPASISPDPASLSPEPGVESPPAQRALHADPGPQRHCEGAEQALPGEETM
EMESEDFCAVCLIGGDLLCCDHCPKVFHLSCHVPTLLSFPTGDWVCTFCRDIQQPEVEYD
CENQRLAAECSGKPLPHGLSACDQRKCERLTLLICSNMLSAPFHEPVSPLARHYYQIIKR
PMDLSVIRAKLSKRSTHHYYSPEEFVADVSLMFRNCAKFNYPDSEVAQAGRSLETFFSSR
LREVFPDRAFPAAEEDSDSDEYDEVYRAAEGGFPWPEKREQCHRKRKRRHSLNWRKHNF
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgttgctcagagtgcccagagcccaggctagcccagagcctgtgtacattc
tgcaacaagtggctgtgctaccagtgcacagacatgcaccagcaccagagagccacccct
cagtgctcagacctgcaccaacaccagaagcccactacccaatgtgtcgacctgcaccaa
agggaccagatggcccccagctccctgcctccacccgaaccaggccctggctcgtgtggc
cgccccctcctcatgtgccactctcacagacaggagcccttggagctcttctgcgagtcc
tgtgacctcatgtgctgcagcagctgtcacctgtccgcccacaagaaccacaggctggtg
cacattggaaaggccctgcaggaccaacagtggcagtttgagagcctgatggctcaggtg
gaggagaggaggtctgcagtggagagcacagccaaacagatagaggacaggctgcacggt
gtaaagatcacgcagaggaaggctgagaaccagattaaaatggcaaagatgattatgatg
aatgagctgaacaaacgggccaacctattaatagagcaactggagaagatctcggaggac
ttccagcggcgtctggaggaccagctgcagggggagatagagatgtgcagccagctggac
cacgtgcagaacttcatcagctgggcaacggcccaccacctcaagaacccactgctcttc
agcagggagctgatttctctccagatgcagcgcctgcttgaacccccactacactcagac
gcctggctccctgtgaagattaagttcaactgggatgccagctactggactaagcagatc
tcaactttgggtcagctcactgcagaggggggaaatcactcctactctgagggcgtggcc
ttccccagcatcctgaggccccagcctatcacctgcttgtccctgccatctgtgtgccat
ggagggcgggagcagagctgtgccttccaggcctgctgtcagccccagatgtgctgcctc
cactgcatacccccacagccagctgtgcagctggacaagactcagcgggaacccaacccc
tactccgccaggtgtgcccagtccaccctcagctctccttcccttgccctgcatcagagt
cagctgctaaggtgctggggccctgacagtcctccaggtccaccagctgtggtgccctcc
tccatgcagcgtccccaacagccagcgcatctcccggctgctgacccaggcctgctcagc
tccagctccaacagtggaggtcttggactccagaccctagtcacagccctctaccagcct
cagattcagccgcttcccgacactcatgcacagccagccacagatggggccagagaaggc
cagagccagcaggccagcagagagagagagcagactcctgggcagacagctgtggacaga
gaggtgttgacagagcagatccaggaggggagcagggagaagacacatgtacagacagct
gtggacagagaggtgttgacagagcagatccaggaggggagcagggagaagacacatgta
cagacaggggtggacagagaggtgctgacagacgggatccagcaggagcagcagcagcag
cagcagcagcagctcctggctcccctagtggccgaactgacagtggagcagcaggaggaa
gagcagcaggaggccaggactacacagccatccagagactgcagagatggcaggagatcc
acttcactggagatgtctgtgacgacccatgggttcagtgttgatgctcagagcagcagg
cccagctcactgtgtgggaggaagagtcgatcccagagcatcccaccagaactggcaggc
ccctccaacagcccctccacagagaggcccctgggggccacccacagcttagcaacagca
acagcagccgtggaacggggacgcatggcagaccagcatggttttatggatctcaggcgg
aggaggctgtcttctgatggagtgatacgatctgtggcctccttggagaggtccttagcc
actcctccctccagaggccagcccagcctatgcctgtcgcctttgaccatctacaagaca
gagcctgattatgtctatgcatatgatgagactgggcatgacgtcaaaggaaaatgcaga
ataccaagaaagactccagacaacagtgacagagaggttcagaaggaacctgggagttcc
agttccaaggttccagtggtgtgtttggaaaggctgaagatcctggtgtctcggatccca
ccacaggggcggcgacagagtgaccctctgccaggcactgcaacagaaaggaccggacct
gttccacagaggggatggaaggacaagatgaatgagggaatatcaaaagaagccaaggtc
gcaacggtcagcccgtctctggataaacaatactcagagagacacactatcaatcaatct
ctcccaccttcagtaatcaatgattggcctgagcatggaggacacagtcctcacaaagag
ctcacactgcaagtacccgccactgatcttgtatcacctccacctttcgctgcacctgac
ctcgactctgactcagatcccaggtcaatctcagaaattgtttctgaccctgaactggac
tcggacccacaaccagaatcggatccccagcaagagtctgacccacaaccagaatctgac
ccacaagctgagtctgcatcggaggctgatctggaatcagttgctgatgaggaatctcct
gctacagaatctgaacctagtgtggaatcagaacctagtgtggaatcagaacctagtgtg
gaatcagaacctagaggggaatcagaaggtagtgaagaatcagagaatggtttagaatca
gagaatggtgaaaacctggatgctgatgcggaatcagaggctgatatagaatcggatctc
caacctgatcctggctcagacccccgttttccatctgaaacacgtccgggattagattca
gacctggaatcagactgtgcacaaccccctgaatcacaagggtctgcagaatctggacca
gatcttgaatcggagccagactcagcccctgacccagcctctatcagtcctgacccagcc
tctctaagtcctgaaccaggagtggagtcccctccagcccagagggccctgcatgcagac
cctggtccacagaggcattgtgaaggagccgagcaggccctgcctggggaagagaccatg
gagatggagagtgaagacttctgtgcagtgtgtctgatcggaggagaccttctgtgctgt
gaccactgtcccaaagtcttccacctgtcctgccatgtgcccactctcctcagcttcccc
acgggtgactgggtgtgtaccttctgcagagatatccagcagccagaggtggagtatgac
tgtgagaaccagaggctggctgcagaatgttcaggaaagccattgcctcatgggctctct
gcttgtgaccagagaaaatgtgagaggttgactctgttgatctgcagcaacatgttaagt
gctcccttccatgagccggtcagtccactggctcgccactactaccagataatcaaaagg
cccatggatctgtctgtgatcagggccaaactcagcaagaggagcactcaccactactat
tcacctgaggagtttgtggctgatgtctccctcatgttcaggaactgtgcaaagttcaat
tatccggactcagaggtggcccaggcaggtcgcagcctggagacgtttttcagctccaga
ctcagggaggtgttcccagacagggccttccctgcagccgaggaggactccgacagcgat
gagtacgacgaggtgtacagagcagccgaaggaggcttcccctggccagagaagagagag
cagtgccacagaaagaggaagaggaggcactctctcaactggaggaagcataacttctag
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