Salmo salar (Atlantic salmon): 106563269
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Entry
106563269 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106563269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106563269
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106563269
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106563269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
zf-RING_4
Prok-RING_4
zf-RING_11
ArfGap
Motif
Other DBs
NCBI-GeneID:
106563269
NCBI-ProteinID:
XP_013984183
UniProt:
A0A1S3KZV0
LinkDB
All DBs
Position
ssa11:66688885..66693566
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AA seq
675 aa
AA seq
DB search
MAAALPALDPDLLREVLECPICLETYNQEQLRPKLLQCGHTVCRQCLEKLLANTINGVRC
PFCSRVSRMSSISQLADNLTVLKILDCASSCTTAGALMCKSCRNRLPRQYCLDCGTVLCD
LCKGEGHQQQGHTVQSIRVAAEQRRKDLGGKLASLREAMDHIQKKRAAIDSLTKNMRVKY
RAVQQEYTRAELRLQEELGRQRRAFAASMAEVEKLNSQILEEQTYLLNLAEVQVVSRCDY
LTMQVKQSDIALLEEDGGVRDEEELDLRSSLDLPTLIKLQDPELVTTEHPEALDVAQLTT
KPCTVNTDEDEGLLEFGVGAMCRAAGAVGDLYRDIDIVMPVDEVCASPGSFKSKSMDEGG
PSSPGDARAGSGPQHCQFVKKMGCKGNLPGMFNLPVSICVTSQGEVLVADRGNYRIQIFN
RKGFQREIRRNPSSIDNFVLSFLGADLPNLIPLSIAITPQGLIGVTDNYDNSVKVYTTDG
HCVACHKNQLIKPWGIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFV
TCDAAGTVYFTQGLGLNIENRHNEHHLEGGFSIGSVGTDGQLGKQLSHFFSETEDFRCIT
GMCVDANGDLLVTDSGRKEILQFPKEGGFNVLIQEGLTCPVGVAVTQKGQLMVLDCWDHC
VKVYTYLQRRRSSTC
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctttgccggctctggacccggacctgctacgggaggtcctggagtgcccc
atctgcctggagacgtataaccaggagcagctgcggcccaagctcttgcagtgtggccac
accgtgtgcagacagtgtctggaaaagctgctggctaacaccattaacggcgtgcgctgc
cctttctgcagcagggtctcccgcatgagcagcatctcccagctggccgacaacctcact
gtgctcaagatcctggactgtgccagctcctgcaccaccgccggtgccctcatgtgcaag
tcctgccgcaaccgcctaccccgacagtactgcctagactgcggcacagtgctttgcgac
ctctgcaagggtgagggccaccagcagcagggccacaccgtccagtccatccgggtggcc
gctgagcagcgccggaaggacctgggtggtaagctggcatccctccgcgaagccatggac
cacatccagaaaaagagggcagccattgacagtctgacaaagaacatgcgggtaaagtac
cgggcagtgcagcaggagtacacccgggctgagctgcgtctgcaggaggagctggggcgc
cagcggcgggccttcgctgcctccatggccgaggtggagaagcttaatagtcagatcctg
gaggagcagacatacctgctgaacctggccgaggtgcaggtggtgtcccgctgcgactac
ctgaccatgcaggtgaagcagagtgacattgccctgttggaggaggacggaggggtgagg
gacgaggaggagctggacctaaggagtagcctggacctgcctactctgatcaagctccag
gaccctgagctggtgactacggagcacccagaggccctggacgtggcccagctcaccacc
aaaccctgcaccgtcaacactgatgaggatgaggggctgctggagtttggggttggtgcc
atgtgcagggctgcaggggcggtgggggacctgtacagagacattgatatagtaatgcct
gttgatgaggtgtgtgcctcaccgggcagctttaaatcgaagtccatggatgaagggggg
ccctcctctcccggtgatgccagggctggctcggggccacagcactgccagtttgtaaaa
aagatgggttgcaagggtaacctgccggggatgttcaacctgccagttagcatctgcgtc
acctcacagggtgaggtccttgtggctgaccggggcaactaccgcatccagatctttaac
cgcaaaggcttccagagggagatccgccgcaaccccagcagcatcgacaacttcgtcctg
agcttcctgggcgccgacctgcccaacctcatcccactgtccatcgctatcacgcctcag
ggcctcatcggggtcaccgacaactacgacaactcggtcaaggtatacaccaccgacggc
cactgtgtggcctgccacaagaatcagctgatcaagccctggggcattgccgccatgccc
tcgggtcaatttgtggtgtctgacgtggagggcggcaagctctggtgcctggcggtggat
cgcaacgtgggtgttgtcaactacaaccgcctatgctcggccgtgcggcccaagtttgtg
acgtgcgacgcggcaggcactgtctacttcacccaggggttgggcctgaacattgagaac
cgccacaacgagcaccacctagaggggggtttctccatcggctcggtgggcacggatggc
cagctgggcaaacagctcagccacttcttctcggagactgaggacttccgttgcatcacg
ggcatgtgcgtggacgcaaacggggaccttttggtgacagacagcggcaggaaggagatc
ctgcagttccccaaagagggtggcttcaacgtgctcatccaggagggactgacgtgccct
gtgggagtggccgtcacacagaaaggacagctgatggtgctggactgctgggaccactgt
gtaaaagtctacacgtacctacagaggagacgctcctccacctgctag
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