Salmo salar (Atlantic salmon): 106576481
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Entry
106576481 CDS
T04363
Name
(RefSeq) leucine-rich repeat-containing protein 4-like
KO
K16351
netrin-G2 ligand
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106576481
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
ig
LRRNT
LRR_9
V-set
Ig_2
Ig_6
Insulin_TMD
V-set_CD47
AAA_7
Motif
Other DBs
NCBI-GeneID:
106576481
NCBI-ProteinID:
XP_014009161
UniProt:
A0A1S3N2B4
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Position
ssa17:complement(50398272..50403661)
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AA seq
936 aa
AA seq
DB search
MSLLGRVAVRRATLLCVVFLMARAWSSASLAMAGAAVPGPQGCPPQCSCSSQLSKVVCTR
RGLTRVPPGIPANTRHLNLMENAIGEVQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLT
SLNTLELFDNRLTGVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRK
LDFISDGAFEGLHNLKYLNLGMCNIRGEMPNLSPLLGLEELEISENLFSEIKPGSFRGLR
SLKKLWVMNSQIGVIERNAFDDLSSLVELNLAHNNLSSLPHDLFSPLRYLVELHLHHNPW
NCGCEALWLARWLREYIPTNSTCCGRCHAPAHMRGRQLVEVDRGETGVLQCSAPFIGDAP
RDLNISAERVAELRCRTAPMSSVRWLLPNGTVLTHASAHQRIAVLNDGTLNFSNVLAADT
GTYTCMVSNAAGNSNASAYLNVSAAELNTSNLSYFTTVTVEVPGPTTEMSKPKTTTSAPN
TGRGAGGEAGGGAEGAGTTTTATPSLFQPVFISTPTVLLQNTEGQPGARPSAIPASKSAT
VKPPDTVPSLDEMMKTTKIIIGCFVAVTLLAAVMLIAFYKLRKRHQQRSTVAAARTVEII
QVDEEDLPPPASAANEIRDHTLPEIRDHNSIQKLDYISHKTDYGFPKPKTDYKGDYTIHK
PKPDYIIHKPKAEYTTYKPTMDYTTHKSTVEFSAHKSTPDFSLHRPKADYSPFRPEYSTH
KQPKADYSPFKPDYSTHPRTPKADYSPFKPDYSSSTHPRTPKADYSPFKPDYGTHPKPKP
DYSPFKPDYSTHPRPKPDYSPYKLDYSTQSKSKPEYSTHKSKPDNSQYKPKSEYTPKAVP
DYIVFKSDYNSPHKQDYGNQKPKVDSSPHKADHHKVDYRTLKPKYNTYKPAGHGAKWTEN
NIGNSLPRTLPSAITNLPEPFVIKTHTKEKVQETQI
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctggggcgggtagctgtgcgtcgagccaccctgctctgtgttgtgttcctg
atggcgcgagcgtggagcagcgcctctctggctatggcgggggcggcagtgccagggcct
caggggtgcccaccgcagtgctcgtgtagtagccagctgagcaaggtggtgtgcactcgg
cgcggcctcactcgcgtgcccccgggcatccccgccaacacgcgccacctcaacctgatg
gagaacgccattggagaggtgcaggccgacaccttccgacacctgcaccaccttgaggtt
ctgcagctgggccgcaacgctatccggcagatcgaggtgggtgccttcaatggcctcacc
agcctaaacacgctggagctatttgacaaccggctaactggggtgcccagtggtgccttt
gagtacctgtccaagctaagggaattatggctgaggaataaccccatcgagagcatccct
tcgtatgccttcaaccgagtgccctcgctcatgcgtttggacttgggcgagctgcgcaag
ctggatttcatctccgatggcgccttcgagggcctgcacaacctcaagtacctcaacctg
ggtatgtgcaacatccggggtgagatgcccaatctgagcccactgctgggcctggaggag
ctggagatctcggagaacctcttctccgaaatcaagccaggctccttccggggcctccgc
tcactcaagaagctgtgggtgatgaattcgcagattggggtgatcgagcgcaatgccttt
gacgacctgagctcgctggtggagctcaacctagcccacaacaacctgagctccctgccg
cacgacctgttctcccccctcaggtacctggtggagctgcacctccaccacaacccctgg
aactgtggctgtgaagccctgtggctggcgcgctggctgcgagagtacatccctaccaat
tctacctgctgcggccgatgccacgcgccggcccacatgcggggccgccagctggtggag
gtggaccggggggagaccggcgtgctccagtgctctgcccccttcataggcgatgcgcca
agagacttgaacatttcggcagagcgcgtagcggagctccgttgccggactgcgccaatg
tcctcggtccggtggctgctgcccaatgggactgtcctgacgcacgcctcggcccaccag
cggatcgccgtgctcaacgacggcacactcaacttctccaacgtcctggcggctgacaca
ggcacctacacctgcatggtgtccaacgcggccggcaactcaaacgcctcggcctacctc
aacgtaagcgcggctgaactcaacacgtccaacctcagctacttcaccacggtgaccgtg
gaagtgccgggacccaccacggagatgtccaagcccaagaccacaacgagcgcccctaac
actggtaggggggcaggaggagaagcaggaggtggtgcggagggcgctggcaccaccacc
accgccacgccctccctctttcagcccgtcttcatctctactcccaccgttctgctccag
aataccgagggccagccaggcgcccgaccgtccgccattcctgcctccaagtccgccacg
gtcaagccacccgacacagtccccagcctggacgagatgatgaaaaccaccaagatcatc
atcggctgcttcgtagccgtcacgctgctggccgccgtcatgctcatcgccttctacaag
ctgaggaagcgccaccagcagcggagcacggtggcagccgcccgtacggtggaaatcatc
caggtggacgaggaggacctgccgccaccagcttctgctgccaacgagatccgagaccac
actctgcccgagatacgagaccacaacagcatccaaaaactggattatatcagccacaaa
acagactatggtttccccaaacccaaaacagactacaagggggactacacaatccacaag
cccaaaccagactacattatacacaagccaaaggctgagtacaccacctataaaccaacc
atggactacactacccacaaatctaccgtggaatttagcgcccacaaatctacaccagat
tttagccttcatagaccaaaggctgactatagcccattcagacctgaatatagcactcac
aagcagcctaaagcggactatagccccttcaaacctgactacagtactcacccgagaaca
cctaaagcagattatagccccttcaaaccggattatagcagtagcactcacccgagaaca
cctaaagcagattatagccccttcaaaccggattatggcactcatccaaaacccaaaccg
gactatagcccattcaaacctgactacagcactcacccacgacctaaaccagactacagc
ccttacaaacttgactacagcactcagtccaaatccaaaccggagtacagtacacacaaa
tccaaacccgacaacagtcaatacaaacccaaatcagaatacacccccaaggccgtgccg
gactacatcgtcttcaaatcagactacaacagcccccacaaacaggattatggcaaccag
aaacccaaagtggattccagtccccacaaagcagaccatcacaaggtggactatcgcacc
ctcaagcccaaatacaacacgtacaagccagcaggacacggggctaaatggacagagaac
aacattgggaactctctccctcgaaccttgcccagcgccatcacaaaccttcctgagccc
tttgtcataaaaactcacaccaaggagaaggttcaggagactcagatttaa
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