Salmo salar (Atlantic salmon): 106576740
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Entry
106576740 CDS
T04363
Symbol
park2
Name
(RefSeq) parkin RBR E3 ubiquitin protein ligase
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04137
Mitophagy - animal
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106576740 (park2)
04120 Ubiquitin mediated proteolysis
106576740 (park2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106576740 (park2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106576740 (park2)
04121 Ubiquitin system [BR:
sasa04121
]
106576740 (park2)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106576740 (park2)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
106576740 (park2)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
106576740 (park2)
Aggrephagy
Other aggrephagy associated proteins
106576740 (park2)
Xenophagy
Other xenophagy associated proteins
106576740 (park2)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
106576740 (park2)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
106576740 (park2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
106576740
NCBI-ProteinID:
XP_014009584
UniProt:
A0A1S3N287
LinkDB
All DBs
Position
ssa18:complement(11107762..11199786)
Genome browser
AA seq
458 aa
AA seq
DB search
MIVYVRFNSSHGFPVELEEGASIAVLKEKVGKLQGVQPEQLRVIFAGRELLSDGTLQGYD
LPEQSTVHVVLPPPGSGRCSDLVLQHRLGRGVDSLTRLDLTSSRLPTTSTGLAVILETDD
EQRAREEPEHTEPRPHSSFYVYCKSVCRAIQPGKLRVRCRACKQGTLTLSRGPSCWDDVL
LPERIHGVCQSEGCLGGVAEFYLKCAAHPTSDDDTSVALDLIMHNVRDVPCIACTDIMSP
VLVSQCPDRHVICLDCFHMYCVTRLNERQFIHHPDVGYSLPCAAGCPDSLITELHHFRAL
GDEQYERYQQYAAEECLLQMGGVLCPAPGCGAGLLPEEDKRMIQCLLSNGLGCGFVFCRD
CKEGFHEGECHVRSSPVSGGALQGYVVNEEAALQARWEQASQETIDETTRPCPHCKVPVE
KSGGCMHMVCPRAQCKFEWCWICRVEWNRECMGNHWFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgtatgtgaggtttaactccagccatggcttcccagtggagctggaggagggg
gccagtatcgcagtgctgaaggagaaggtggggaagctgcagggggtacagccggagcag
ctgagagtcatctttgctggcagagagctgcttagcgacggcaccctccagggctatgac
ctcccagagcagagtaccgtgcacgtggtgctgcctcccccggggtcgggccggtgctct
gacctggtcctgcagcaccgtctgggtcgaggggtggacagcctcacccgcctggacctc
acctcctcccgcctgcccactacctccaccggcctggccgtcatactggaaactgatgat
gagcagagagccagggaagaacctgagcacacagagcccagacctcacagcagcttctat
gtgtactgcaagagtgtgtgccgggccatccagccggggaagctacgcgtgcgctgcaga
gcctgcaagcagggaaccctcaccttgagccggggcccgtcatgttgggacgatgtcctc
ctcccagagcgtatccatggtgtctgtcaatcagagggttgccttggcggagtagcggag
ttttacctgaagtgtgctgcccaccccacctctgatgatgacacgtctgtggccctggac
ctcatcatgcacaatgtgcgggatgtcccatgcattgcctgcacagatatcatgagtcca
gtgttggtgtctcagtgtccagaccgccatgtcatttgtctagactgcttccacatgtac
tgtgtgacccgtctcaacgagcgacaattcatccaccacccagatgtcggctactcactt
ccctgtgcagctggctgcccagactctctcataacggagttgcatcacttccgggcccta
ggtgatgaacagtacgagcggtaccagcagtatgcagccgaggagtgtctcctccagatg
ggaggggtgttgtgtccagcccctggatgtggcgcaggcctgctgcctgaggaggacaag
aggatgatccaatgtctgctcagcaacggtttgggatgcgggtttgtgttctgccgtgac
tgtaaggaagggttccatgagggcgaatgtcatgtgaggtcatcacctgtctcaggagga
gccctgcagggttatgtagtgaacgaggaggcagctcttcaggctcggtgggagcaggcc
tcgcaggagactatagacgagaccacccgtccatgtccacattgcaaggtcccagtggag
aagagtggtggctgtatgcacatggtgtgtccccgtgcccagtgtaagtttgagtggtgc
tggatttgtcgtgtggagtggaacagggagtgtatgggcaaccactggtttggctga
DBGET
integrated database retrieval system
